Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00612 ATGAGTTTGGGCACTGCCGAGGATGATCCGGGTTCTGAAATCCACATCCCGGCGGAGATTGACTGGCACATGTTGGATAAGTCCAAGTTTTTCTACCTCGGCGCCGCCTTATTCTCCGGCGTTTCCTTCACGCTCTACCCCATGGTCGTGTTGAAGACGCGCCAGCAGGTTTCCTCCTCACGCTTCTCCTGCCTCAACATGTCCTGCGCCATAATGCGCTACGAGGGTCTCAGAGGCTTCTACAAAGGCTTCGGCACTTCCCTCATGGGAACCGTCCCCGCGCGTGCGCTCTACATGGCCTCGCTTGAAGTCACAAAAAGTAACGTCGGGACTGCCTTACTCGAATTGGGGTTCTCCGAGACGACGGCTGTGGCGGTGGCTAATGCCGCTGCGGGTGTTACTTCCGCCATGGCGGCGCAGCTGGTGTGGACCCCGGTTGATGTCGTCAGTCAAAGGCTCATGGTTCAGGGGAGTGGAGGAAGTAAAAACATTCTGGGTAATCATAATTATGAGAGTTACAGAAACGGGTTTGATGCCTTTAGGAAGATTCTGTGTGCTGATGGAGCAAGAGGGTTCTACAGAGGGTTTGGGATTTCGATATTGACATATGCTCCTTCCAATGCGGTTTGGTGGACTTCTTATTCCATGGTTCACAGATTCATTTGGGGTACTTTTGGTTCCTACATGAGTAAGGGTAAAACTGAAAGCAATGATAATTTGAGTGGTTTTAGGCCTAATTCGAAGACAGTAGTGGCGGTTCAAGGGTTAAGTGCCGTTATAGCTAGTGGAGTATCTGCAATTGTGACAATGCCTCTTGATACCATTAAGACAAGGTTGCAGGTGTTGGACAGTGAAGAGCATGGGAGAAGGAGGCCTTTAACTTTTGTTCAGACTGTGAGGAATTTGGTGAAGGAAGGTGGATTGCCTGCTTGTTACAGAGGATTGGGACCAAGATGGGCTTCCATGTCATTATCTGCTACAACTATGATTACTACTTACGAGTTTTTGAAAAGAATGTCTACCAAGAGTCAATAG 1035 0.4918 MSLGTAEDDPGSEIHIPAEIDWHMLDKSKFFYLGAALFSGVSFTLYPMVVLKTRQQVSSSRFSCLNMSCAIMRYEGLRGFYKGFGTSLMGTVPARALYMASLEVTKSNVGTALLELGFSETTAVAVANAAAGVTSAMAAQLVWTPVDVVSQRLMVQGSGGSKNILGNHNYESYRNGFDAFRKILCADGARGFYRGFGISILTYAPSNAVWWTSYSMVHRFIWGTFGSYMSKGKTESNDNLSGFRPNSKTVVAVQGLSAVIASGVSAIVTMPLDTIKTRLQVLDSEEHGRRRPLTFVQTVRNLVKEGGLPACYRGLGPRWASMSLSATTMITTYEFLKRMSTKSQ 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00612 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 249 339 IPR018108 -
Phco7g00612 344 Pfam Mitochondrial carrier protein 126 222 IPR018108 -
Phco7g00612 344 Pfam Mitochondrial carrier protein 40 108 IPR018108 -
Phco7g00612 344 Pfam Mitochondrial carrier protein 252 343 IPR018108 -
Phco7g00612 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 220 IPR018108 -
Phco7g00612 344 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 12 343 - -
Phco7g00612 344 Gene3D Mitochondrial carrier domain 28 344 IPR023395 -
Phco7g00612 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 27 108 IPR018108 -
Phco7g00612 344 PRINTS Mitochondrial carrier protein signature 81 99 IPR002067 GO:0055085
Phco7g00612 344 PRINTS Mitochondrial carrier protein signature 132 154 IPR002067 GO:0055085
Phco7g00612 344 SUPERFAMILY Mitochondrial carrier 24 336 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00612 Phco-Chr7 4618428 4619462 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00612 7 4618428 4619462 Phco7g00612 7 4618428 4619462 ECH