Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00575 ATGGCGGAGGAAGCGCAGTATTCATCGGGAACCGAGTCGGCATCCCTCAAGCGCAAGTACGAAGACCAACCCTCCGACAGACCCACCGGATTCTCAGCGGGCCCTGCCACCGGCATCGAGCTTGCCAAGCAGCGTGCTCAAGAAGTCGCCGCTCGCCTCCTCAGCGTTACTCCTCCTCCACCGCTCGACGCTAAGCGTCCCAAACCCGATAACGGTGCTCCTACCTCCGGCTTTGATTCTTACGATGCGAAGCCTCAGTACTCGGCCATTCCTCCCGTCTCCTACAGTCACCAAGGAACGAGTAAGAAGATTGATATCCCTAACGGCAGGGTTGGTGTGATTATTGGCAAAGCTGGAGAGACCATTAAGTATCTCCAGCTGCAGTCTGGTGCCAAAATTCAAGTTACTCGCGATATGGACGCCGACCCTAATTCCACTACTAGGACGGTTGAGCTTATGGGCACTCCCGAGGCAATTGCCTCTGCTGAGAAACTCATCAATGAAGTTCTTGCTGAGGCTGAATCTGGGGGTTCTGGCATTGTAGCTCGGAGACTGACTGGACAAGCTGGGTCCGATGAATTTGTCATGAAAATCCCAAATAATAAGGTTGGCCTTATAATTGGTAAAGGGGGAGAAACTATAAAGAATATGCAAGCTTCTACTGGTGCACGGATTCAGGTGATACCGCTTCATCTTCCCCCAGGTGACACATCAACCGAAAGAACATTAAAAATTGATGGGACTTCTGAGCAAATTGAGTCTGCAAAGCAGTTGGTTAATCAAGTCATCAGTGGTGAGAATCGTGTCAGAAATCCTGCAATGTCTGGTGGATATCCTCAGCAAGGCTACCAATCTCGACCATCCTCTAACTGGGCTCCCCCTGCTCAAATGCAGCAACCTGGTTATGGCTATATGCAACCTGGAGCATATTCTGGTCCATCACCTCAGTATAATATGCCTCAACCACCTTATGCAGGCTATCCTCCTCAACAACCTGGTGGATATTCCACCAGCTGGGACCAGTCTTCTGCACCACCTCACCAACAGTCTACTCAAGCTGGTGGCTATGATTACTATAGTCAACAGCCACAGCAACCGCAAAATCCTGGAGGGACTGCACCTCCAGTGGATGGCTCTGCTTACAGTTACAGTCAACCACCTTCTTCTGGTTATAGCCAACCTGGACAGGGTTATGCTCAGGACAGCTATAATGCATACAATGCACAATCTCAATCAGGGTATGGACAGCCACCAACATATGATCAGCAGCAAGGCTATGGGTCAACTACTACTGGCTATGGTAGTGGGAATAACTCAGCACCAGATGGCCACACTGCGAGCTATGCATCACAGGGAGATTCAACCCAAGCTCCATCTACCCAGTCGACCACCATTGCGCAGCAAGGTTATACTACCAGTCAACAGCCCAGCTCAAACACTGCCAGCTACCCACCTCAGGGAACTCCTCAGTCAGGTTATGGGGTTCCCCCTACATCCCAAGCTGCTTATGGAAGTCAGCCACAGCCAGGTTATGGACCTGGTTATGGAGTCCCTCAATCTCAAAAGCCTAGTGGTAATCCTCCTGTTTATGGACAGTCGCAGTCACCTAGTGCGGTAGGAGGCTATGGTCAGTCAGCATATCCTACTCAGCCTCCACCTTCCGGTTATTCTCAACCCCAACCAGAATCTGGTGCTCAGAGAGTACCACCATCAGGTTATGGTGCAGGGCAACCAGGGTATGGTTCTCAAACATATGGTGCACCTCAGGGTGGCCAGCCTGCTTATGGTCAGGCACCGCCTCCATACAGCAACAGCTCTTATGGTGCTGGTTATTCTCAGGCTCCAGCATATACTGGCGATGGTAATGCCAGTGGGAACACTCAGCCTCAGACTGCCGTTGCTAAAGCATCGCCTCAGAGTTGA 1923 0.5117 MAEEAQYSSGTESASLKRKYEDQPSDRPTGFSAGPATGIELAKQRAQEVAARLLSVTPPPPLDAKRPKPDNGAPTSGFDSYDAKPQYSAIPPVSYSHQGTSKKIDIPNGRVGVIIGKAGETIKYLQLQSGAKIQVTRDMDADPNSTTRTVELMGTPEAIASAEKLINEVLAEAESGGSGIVARRLTGQAGSDEFVMKIPNNKVGLIIGKGGETIKNMQASTGARIQVIPLHLPPGDTSTERTLKIDGTSEQIESAKQLVNQVISGENRVRNPAMSGGYPQQGYQSRPSSNWAPPAQMQQPGYGYMQPGAYSGPSPQYNMPQPPYAGYPPQQPGGYSTSWDQSSAPPHQQSTQAGGYDYYSQQPQQPQNPGGTAPPVDGSAYSYSQPPSSGYSQPGQGYAQDSYNAYNAQSQSGYGQPPTYDQQQGYGSTTTGYGSGNNSAPDGHTASYASQGDSTQAPSTQSTTIAQQGYTTSQQPSSNTASYPPQGTPQSGYGVPPTSQAAYGSQPQPGYGPGYGVPQSQKPSGNPPVYGQSQSPSAVGGYGQSAYPTQPPPSGYSQPQPESGAQRVPPSGYGAGQPGYGSQTYGAPQGGQPAYGQAPPPYSNSSYGAGYSQAPAYTGDGNASGNTQPQTAVAKASPQS 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00575 640 ProSiteProfiles Type-1 KH domain profile. 99 166 - -
Phco7g00575 640 MobiDBLite consensus disorder prediction 598 640 - -
Phco7g00575 640 MobiDBLite consensus disorder prediction 1 101 - -
Phco7g00575 640 MobiDBLite consensus disorder prediction 331 367 - -
Phco7g00575 640 Pfam KH domain 195 260 IPR004088 GO:0003723
Phco7g00575 640 Pfam KH domain 103 168 IPR004088 GO:0003723
Phco7g00575 640 SMART kh_6 98 171 IPR004087 GO:0003676
Phco7g00575 640 SMART kh_6 190 264 IPR004087 GO:0003676
Phco7g00575 640 ProSiteProfiles Type-1 KH domain profile. 191 259 - -
Phco7g00575 640 FunFam KH domain-containing protein 186 287 - -
Phco7g00575 640 Gene3D K Homology domain, type 1 94 193 IPR036612 GO:0003723
Phco7g00575 640 MobiDBLite consensus disorder prediction 378 506 - -
Phco7g00575 640 MobiDBLite consensus disorder prediction 269 640 - -
Phco7g00575 640 MobiDBLite consensus disorder prediction 277 296 - -
Phco7g00575 640 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 194 266 IPR036612 GO:0003723
Phco7g00575 640 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 101 177 IPR036612 GO:0003723
Phco7g00575 640 Gene3D K Homology domain, type 1 194 266 IPR036612 GO:0003723
Phco7g00575 640 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 90 460 - -
Phco7g00575 640 MobiDBLite consensus disorder prediction 519 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00575 Phco-Chr7 4311074 4316340 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00575 7 4311074 4316340 Phco7g00575 7 4311074 4316340 ECH