Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00568 ATGGACAGTTTCCCGATCTTCTTTCTCCTCGCCACCCTCATCACCCTCGTCTCCGGTGGTCGTGACGAGATTCTCCGATTGCCCTCCGAAGCTTCCAGATTCTTCCAAGCACCTGCTGCTGATGAGAACCATGAGGGTACGAGGTGGGCCCTTTTAATTGCCGGATCCAATGGCTATTGGAATTACAGACACCAGTCTGATGTTTGCCATGCGTATCAACTGCTGAGGAAAGGTGGTCTGAAAGAAGAAAATATTGTGGTATTTATGTATGATGACATTGCTTTCAATGAAGAGAACCCACGGCCTGGAGTCATTATTAACAGCCCTCATGGAAATGATGTTTACAAGGGAGTCCCTAAGGATTACGTTGGTGAAGATGTCACTGTTAACAACTTTTTTGCTGCTATACTTGGAAATAAATCAGCTCTTACCGGTGGCAGCGGGAAGGTTGTAGATAGTGGTCCCAATGATCATATATTTATATACTATTCTGATCATGGCGGTCCAGGAGTGTTAGGGATGCCTACTAGTCCATACACGTATGCGTCCGATCTGATTGAAGTCTTAAAGAAAAAGCATGCTTCTGGAACTTATAAAAGCCTAGTATTTTATCTAGAGGCATGTGAATCTGGGAGTATCTTTGAAGGTCTTCTTCCTGAAGGTATGAATATCTATGCAACGACAGCAGCAAATGCAGAAGAAAGCAGTTGGGGAACGTATTGTCCCGGGGAGTATCCTAGTCCCCCCCCTGAATATGAAACCTGCCTGGGTGACCTGTACAGTGTTGCTTGGATGGAAGACAGTGACATTCACAATTTGCAAACAGAAACTTTACATCAACAATTTGAATTGGTGAAACAAAGGACTATGAATGGAAATTCAGCCTATGGTTCCCACGTGATGCAGTATGGTGACATAAGGCTTAGCAAGAACAATCTCTCCTTATATTTGGGTACAAATCCTGCTAATAATAATTTTTCTTTTCTGGAGCAAAACTCATTGGTGCCACCTTCAAAAGCAGTCAACCAACGTGATGCAGATCTAGTCCATTTATGGGACAAGTACCGCAAAGCTCCTGTAGGTTCTTCTAGGAAATCTGTAGCTCAGAAACAAATTCTAGAAGCGATGTCTCACAGAATGCATATAGACGACAGCATGAAACTTATTGGAAAACTGTTATTTGGCATTGAAGAGGGTTCAGAAATGCTCAACAGTGTTAGACCTGCTGGGCAACCACTTGTTGATGACTGGGACTGCCTTAAAACACTGGTTAGGACTTTTGAGACACATTGTGGTTCCCTGTCTCAGTATGGGATGAAACATATGAGGTCCTTTGCAAACTTCTGCAATGCTGGAATACGGAAAGAGCTAATGGCCGAGGCATCTGCACAAGCATGCGTCAGTATTCCTACAACTCCCTGGAGTTCTCTGCGCAGCGGTTTCAGTGCATAA 1452 0.4394 MDSFPIFFLLATLITLVSGGRDEILRLPSEASRFFQAPAADENHEGTRWALLIAGSNGYWNYRHQSDVCHAYQLLRKGGLKEENIVVFMYDDIAFNEENPRPGVIINSPHGNDVYKGVPKDYVGEDVTVNNFFAAILGNKSALTGGSGKVVDSGPNDHIFIYYSDHGGPGVLGMPTSPYTYASDLIEVLKKKHASGTYKSLVFYLEACESGSIFEGLLPEGMNIYATTAANAEESSWGTYCPGEYPSPPPEYETCLGDLYSVAWMEDSDIHNLQTETLHQQFELVKQRTMNGNSAYGSHVMQYGDIRLSKNNLSLYLGTNPANNNFSFLEQNSLVPPSKAVNQRDADLVHLWDKYRKAPVGSSRKSVAQKQILEAMSHRMHIDDSMKLIGKLLFGIEEGSEMLNSVRPAGQPLVDDWDCLKTLVRTFETHCGSLSQYGMKHMRSFANFCNAGIRKELMAEASAQACVSIPTTPWSSLRSGFSA 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00568 483 PIRSF Legumain 2 483 IPR001096 GO:0006508|GO:0008233
Phco7g00568 483 Pfam Peptidase C13 family 48 318 IPR001096 GO:0006508|GO:0008233
Phco7g00568 483 CDD legumain_C 345 466 - -
Phco7g00568 483 PIRSF AE 2 483 IPR043577 GO:0004197|GO:0051603
Phco7g00568 483 Gene3D - 46 342 - -
Phco7g00568 483 Gene3D - 343 470 IPR046427 -
Phco7g00568 483 PANTHER HEMOGLOBINASE FAMILY MEMBER 29 468 IPR001096 GO:0006508|GO:0008233
Phco7g00568 483 FunFam Vacuolar-processing enzyme beta-isozyme 46 342 - -
Phco7g00568 483 FunFam Vacuolar-processing enzyme beta-isozyme 343 471 - -
Phco7g00568 483 PRINTS Hemoglobinase (C13) cysteine protease signature 74 103 IPR001096 GO:0006508|GO:0008233
Phco7g00568 483 PRINTS Hemoglobinase (C13) cysteine protease signature 149 168 IPR001096 GO:0006508|GO:0008233
Phco7g00568 483 PRINTS Hemoglobinase (C13) cysteine protease signature 49 73 IPR001096 GO:0006508|GO:0008233
Phco7g00568 483 PRINTS Hemoglobinase (C13) cysteine protease signature 121 136 IPR001096 GO:0006508|GO:0008233
Phco7g00568 483 PRINTS Hemoglobinase (C13) cysteine protease signature 198 214 IPR001096 GO:0006508|GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00568 Phco-Chr7 4270166 4275845 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00568 7 4270166 4275845 Phco7g00568 7 4270166 4275845 ECH