Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00552 ATGGCACCACCGTTGTTCAATTGGGGGGTGAAGGACACTCACAGGGGAACCCCAGTGGTGGTGAAGATGGAGAACCCAAATTGGTCGATGGTGGAACTGGAGGGTCCCGAAGAAGAGGACTTAATGATACAAACTTCTCCTTCGGGGGTTTCACGAGACAAAGGAAAAGGAAGAGGCAAAAACGCGAAACAGCTCACATGGGTTCTTCTCCTCAAAGCACACCGCGCTGCGGGTTGCTTGACCTCCCTCGCGCCGGCATTGTGGGGGCTCGTATCAGCCGTGAAGCGCCGTGTCGCCGCCGGAAAAACCGATACCGACACCGATGGCGGCAGAGAGCTGGAGAACCCCACCGTGAAGACGCGTTTCTATTCCTGCATCAAGCTCTTTCTGTGGCTTTCCGTTTTTCTCTTGTTTTTCGAGGTTGCTGCGTACTTCAAAGGGTGGCATTTCGGTGCGGCGAGGCTTCAGTTGGAGCATTTTTTGTGGGCACCCGCGTTTGGAGTCAAGGATTTATTCGCTTGGCTCTACGCGAGGTGGGTTTTGGTTCGCGTGGAGTATCTCGCTCCTCCTCTGCAGTTTCTAACCAATGCGTGCATCGTGCTTTTCCTTATTCAGAGTATGGATAGGCTTGTTCTGTGTTTGGGGTGTTTCTGGATCCGGTTTAAGAAGATCAAGCCTGTTCCCAAAGGCGGAGATGTTGTAGATCTTGAATCTGGAGAAAGAAAGAGTTTTTCGTTTTTCCCAATGGTCCTTGTGCAGATCCCCATGTGCAATGAGAAAGAGGTTTATCAGCAATCGATTGCTGCGGTGTGTAATTTGGATTGGCCGAAGGGGAAGGTATTGATTCAGGTTTTGGATGATTCCGATGACCCAACGACGCAGTTGCTAATAAAGGAGGAGGTTCAGAAGTGGCAACACGAGGGTGCCAACATTTTGTACCGGCATCGCGTGATTAGAAATGGGTACAAGGCTGGGAATTTGAAATCCGCTATGAATTGTAGCTACGTTAAAGACTATGAGTTTGTTGCAATTTTTGATGCAGATTTTCAGCCTACTCCGGATTTTCTCAAAAAAACGGTTCCTCATTTTAAGGATAATGATGAATTGGGGCTTGTTCAAGCAAGATGGTCCTTTGTGAACAAGGATGAGAACCTGCTAACGAGGTTGCAGAACATTAACCTGTCTTTTCATTTTGAGGTAGAGCAGCAAGTGAATGGGATTTTCATTAACTTCTTTGGGTTCAATGGAACTGCTGGAGTATGGAGGATAAAGGCTTTGGAGGATTCTGGTGGTTGGTTGGAGAGAACTACTGTTGAGGACATGGACATTGCAGTTCGAGCTCATCTTCATGGCTGGAAATTCATTTTCCTCAATGATGTTGAGTGCCAATGTGAACTTCCCGAATCTTATGAAGCTTACAGGAAACAACAGCATAGATGGCATTCTGGGCCAATGCAATTGTTCCGCCTTTGTTTGCCTGATATCATACGGTCCAAGATAAGTGTGTGGAAGAAATTCAACATGATATTTCTCTTCTTCCTTCTTAGGAAGCTGATATTACCATTCTATTCATTCACCTTATTTTGTATAATTCTACCTATGACAATGTTCGTCCCGGAGGCCGAGCTTCCTGCGTGGGTTGTGTGTTACATCCCTGCTGCCATGTCCTTTCTCAACATTCTTCCAGCTCCAAAGGCCTTTCCCTTTATTGTCCCTTATCTCCTATTTGAGAACACCATGTCAGTTACCAAGTTCAATGCTATGATCTCAGGCCTGTTCCAGCTAGGTAGTGCATACGAGTGGGTGGTCACTAAGAAATCTGGTCGTTCCTCTGAAGGCGATTTGGTTTCACTGATAGAGAAAGGACCAAAGCATCAAAGAGGGTCCTCAGCACCTGATCTTGAGGAAATGAAAGAGGAACTTAGAATGCAGGAGCAGCAGAAGGCCTCTAAGAAGAAGAAAAAGCATAACAGAATATATATGAAGGAGCTTGCTTTGGCCTTTCTACTCCTAACAGCCTCAGCAAGGAGTCTCCTCTCTGCTCAAGGGATCCATTTCTACTTTTTGTTATTCCAGGGAATATCATTCCTGTTGGTTGGTCTTGACTTGATTGGTGAACAGGTGGACTGA 2130 0.4643 MAPPLFNWGVKDTHRGTPVVVKMENPNWSMVELEGPEEEDLMIQTSPSGVSRDKGKGRGKNAKQLTWVLLLKAHRAAGCLTSLAPALWGLVSAVKRRVAAGKTDTDTDGGRELENPTVKTRFYSCIKLFLWLSVFLLFFEVAAYFKGWHFGAARLQLEHFLWAPAFGVKDLFAWLYARWVLVRVEYLAPPLQFLTNACIVLFLIQSMDRLVLCLGCFWIRFKKIKPVPKGGDVVDLESGERKSFSFFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKGKVLIQVLDDSDDPTTQLLIKEEVQKWQHEGANILYRHRVIRNGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKKTVPHFKDNDELGLVQARWSFVNKDENLLTRLQNINLSFHFEVEQQVNGIFINFFGFNGTAGVWRIKALEDSGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRSKISVWKKFNMIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPAAMSFLNILPAPKAFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLIEKGPKHQRGSSAPDLEEMKEELRMQEQQKASKKKKKHNRIYMKELALAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQVD 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00552 709 Coils Coil 634 654 - -
Phco7g00552 709 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 241 465 IPR029044 -
Phco7g00552 709 MobiDBLite consensus disorder prediction 623 647 - -
Phco7g00552 709 SUPERFAMILY Nucleotide-diphospho-sugar transferases 250 527 IPR029044 -
Phco7g00552 709 MobiDBLite consensus disorder prediction 623 654 - -
Phco7g00552 709 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 178 706 - -
Phco7g00552 709 FunFam probable xyloglucan glycosyltransferase 5 241 466 - -
Phco7g00552 709 Pfam Glycosyl transferase family group 2 342 538 IPR001173 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00552 Phco-Chr7 4087961 4090621 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00552 7 4087961 4090621 Phco7g00552 7 4087961 4090621 ECH