Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00541 ATGTCATGGCTGGCTCGCTCCTTCGCAAATTCTCTCCGACTCGATGGCGACGGAGACGACGAAAACGACAGCGTACTCGATCCACCTACCACGTCATTGAGAGACCCACTGCAGCCGCAAACACGAGAAAATGCATTCGGATCAGAATCAGAAGAAGAAGAAGACGAAGAAACGGAAGGGCGCGGAGTCAAAGAGGACCTCGACGAAATCAAGCGAACCCTAACTCGTCAATTTTGGGGAATGACGTCCTTCCTCGCTCCGCCATCAACGGATTCTCATTCTTTTTCTCCTTCTCATGTTCAATCCGATCCCTCTTCGTTCATCTCCGATCAATTAACACATCGCTCTCTTTCTCCGAACGAAGAACCGCAATTGGACGAGGCTGCCGTTTCCAATCGCTCTAATCCGGTTAAGTTTGGATCCGATTCGGAAGGGAATTGCGGTATCGAACAACGTGCGGTTGGAATCACGGAGGAGGTCTTGGCCTTCGCGATGAACATAGCTATGCATCCCGAGACGTGGTTGGATTTTCCTATTGATGAAGAAGACGACACCGAAGATTTTGACATGTCTGATGCACAACAAGAGCATGCTGCGGTTGTTGAAAGATTAACTCCGAGATTAGCTGCGCTCAGAATTGAACTATGCCCTTGCCATATGAGTGAAAGTTATTTCTGGAAAGTGTATTTTGTACTTTTGCATTCAAGGCTTAACAAAGAAGATGCAGGAGTTTTGTCTACACCCCGGATTACGGCAGCCAGAGCAATGTGGATGCAGGAATTGCATAAACAAACAAAGCCTGACTTTGAATTTTTTGGAAGAAGTGCTTCCTACCCAAGAGACAACGCACGGCACAATGAATTAACTCCCAGCCTATTAGATGATGCTTATTCTGATGACATGCCTAATAAGACATATGGATATAGAACAACCTCTTTTTCCGCGAGGTCAGATTACGAGACTGACAAATACATGGTTGAATCTTCTGGAACGCATTTCACTGATAAGTCTGTTATTGAGGAAAATTCAATTATTAAAACTGATAACAAGGATTCGATATGTAGTCGACCCTCTCAAATTATTATTAAGGATTATGATGAAGAGGACGATGTGTGGCCAGAGGAAGATTCTGATTTAGAAGGTTATGGTGGAACAACTCACCCCATAATTGTAAATGAAGAAGACATATCCTTCAGCGATCTCGAGGATGATGATTATGGCATTAAACCTGTTAGTTTAAGTACAGGTGGTTTGAAATCCGAAATGAGAATGTGGGATGAAATATATGCTACAATCCGAAGGACATCTCTCTTTCTGAAGGCATCTGAAGCTGCGAATTAG 1341 0.44 MSWLARSFANSLRLDGDGDDENDSVLDPPTTSLRDPLQPQTRENAFGSESEEEEDEETEGRGVKEDLDEIKRTLTRQFWGMTSFLAPPSTDSHSFSPSHVQSDPSSFISDQLTHRSLSPNEEPQLDEAAVSNRSNPVKFGSDSEGNCGIEQRAVGITEEVLAFAMNIAMHPETWLDFPIDEEDDTEDFDMSDAQQEHAAVVERLTPRLAALRIELCPCHMSESYFWKVYFVLLHSRLNKEDAGVLSTPRITAARAMWMQELHKQTKPDFEFFGRSASYPRDNARHNELTPSLLDDAYSDDMPNKTYGYRTTSFSARSDYETDKYMVESSGTHFTDKSVIEENSIIKTDNKDSICSRPSQIIIKDYDEEDDVWPEEDSDLEGYGGTTHPIIVNEEDISFSDLEDDDYGIKPVSLSTGGLKSEMRMWDEIYATIRRTSLFLKASEAAN 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00541 446 SUPERFAMILY BSD domain-like 155 241 IPR035925 -
Phco7g00541 446 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 406 - -
Phco7g00541 446 SMART wurzfinal6 185 237 IPR005607 -
Phco7g00541 446 MobiDBLite consensus disorder prediction 1 68 - -
Phco7g00541 446 Gene3D BSD domain 145 245 IPR035925 -
Phco7g00541 446 MobiDBLite consensus disorder prediction 89 141 - -
Phco7g00541 446 MobiDBLite consensus disorder prediction 25 45 - -
Phco7g00541 446 MobiDBLite consensus disorder prediction 89 144 - -
Phco7g00541 446 Pfam BSD domain 185 241 IPR005607 -
Phco7g00541 446 MobiDBLite consensus disorder prediction 48 62 - -
Phco7g00541 446 ProSiteProfiles BSD domain profile. 185 237 IPR005607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00541 Phco-Chr7 3990720 3994810 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00541 7 3990720 3994810 Phco7g00541 7 3990720 3994810 ECH