Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00536 ATGGATACCAGAGGCCTTCTCCTTCTCCTTATTCTCTCCCTTATTTCTTCATCAAACTTTGCAACATCTCACTCCACAGTGCGCTTCCTTCCTGGTTTCCAGGGACCCCTTCCTTTTCTACTTCAAACTGGGTATGTGGAAGTGGGTGAAGGCGAAGCAGAGGAGAATGCAGAATTGTTCTACTATTTTATTCACTCAGAGAATGATCCCAAACGGGATCCTCTCCTTCTTTGGCTAACGGGAGGACCTGGTTGCTCTGCTTTTTCTGGTCTAGTTTTTGAAATAGGTCCACTGGCCTTTGAAAACCAGGAATACAATGGAAGCTTACCTAATCTGAAATTGAAACCACAATCATGGACAAAGGTAAGTAGCATTATATTCGTGGATCTGCCAGCGGCTACAGGCTTCTCTTATCCCAAAACAAAACGTGCTGTTAATCAAAGTACCTTAAAGCTAGTTCGCCATGCTCATCAATTTCTCAGGAAGTGGCTAATGGATCATCCGGAATTTCTCTCAAATGAGGTGTACATTGCTGGCGACTCATACTGTGGCCTTCCTATACCAATTATTGTTCAAGAAATTTCACACGGAAACCAAGGTGGTATCCAACCATGGATAAATCTCCAGGGATACCTGCTGGGGAATCCCATAACAACATCTACTGAAAAAAACTACGAAATACCGTTTAATCATGGCATGGCACTCATTTCTGATGAACTATACGAGTCACTGCAAAAGAATTGTAGAGGAGAGTATCAGAATATAGACCCAAGAAACACATTTTGTGCTAGAGACATGCAATCCTACGAGGAGTCTATTTCAGGGATTGAAATTGGGCATGTTTTGGAACCCTATTGCGAGGAGTCTGGTCTGCGTAATCCAATTGAAGACTCTTGGAGCTGCAGGAGGTCTCTTGCTCATGAAACCTCTCCTCTCACATTGCCACCTTTAACTTGCAGGGCTCATGCATATGTCCTTTCTAACTATTGGGCGAATGATGATAATGTCCGTAAAGCACTGCATGTTCGGAAGGGAAGTATAGGGAAATGGAAGCGCTGTAACCATGACATACCTTTTGAGACTGATATCTCTACCAGCTTCCCATATCACGTCAATCTCAGCAGAAAAGGCTACCGTTCATTAATATACAGTGGGGATCATGACATGGTTGTTCCATTCCTGTCTACACAAGCGTGGATAAGAGCTTTAAACTATTCCATCGTGTCTGACTGGAGGCAGTGGTATTACAATGGCCAAGTAGCAGGATACACGAGAACTTATTCAAATCGGATGACATTTGCAACTGTGAAGGGTGGAGGGCACACAGCTCCGGAGTTTAGACCTGAAGAATGTTTAGCCATGTTCATGAGATGGATATCTAACAGGCCACTTTAG 1395 0.4358 MDTRGLLLLLILSLISSSNFATSHSTVRFLPGFQGPLPFLLQTGYVEVGEGEAEENAELFYYFIHSENDPKRDPLLLWLTGGPGCSAFSGLVFEIGPLAFENQEYNGSLPNLKLKPQSWTKVSSIIFVDLPAATGFSYPKTKRAVNQSTLKLVRHAHQFLRKWLMDHPEFLSNEVYIAGDSYCGLPIPIIVQEISHGNQGGIQPWINLQGYLLGNPITTSTEKNYEIPFNHGMALISDELYESLQKNCRGEYQNIDPRNTFCARDMQSYEESISGIEIGHVLEPYCEESGLRNPIEDSWSCRRSLAHETSPLTLPPLTCRAHAYVLSNYWANDDNVRKALHVRKGSIGKWKRCNHDIPFETDISTSFPYHVNLSRKGYRSLIYSGDHDMVVPFLSTQAWIRALNYSIVSDWRQWYYNGQVAGYTRTYSNRMTFATVKGGGHTAPEFRPEECLAMFMRWISNRPL 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00536 464 Gene3D alpha/beta hydrolase 37 464 IPR029058 -
Phco7g00536 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185|GO:0006508
Phco7g00536 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185|GO:0006508
Phco7g00536 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 431 444 IPR001563 GO:0004185|GO:0006508
Phco7g00536 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185|GO:0006508
Phco7g00536 464 FunFam Carboxypeptidase 366 461 - -
Phco7g00536 464 SUPERFAMILY alpha/beta-Hydrolases 27 463 IPR029058 -
Phco7g00536 464 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 26 448 IPR001563 GO:0004185|GO:0006508
Phco7g00536 464 FunFam Serine carboxypeptidase-like 11 21 464 - -
Phco7g00536 464 Pfam Serine carboxypeptidase 31 461 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00536 Phco-Chr7 3952462 3957156 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00536 7 3952462 3957156 Phco7g00536 7 3952462 3957156 ECH