Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00517 ATGTCGAATAGATCTGGTCAGGGTGGACAAGACAACAATAAAAAGGGTTTCACCAAAACCCATTACCACAACAACTATGTCCGCAAAAATCCCAATCCAACCCTCTCAACCTCCCTCAGGCAAACCCAACCATCCATCCCCGCCACCACTAGCGGAGCCCCAAGCAGAGCCCAGAATGGGAATTTTGTTAAATACTTACCTCAAGACGAGGCCGTGGCGGCGGGTCTTGGCGCCGAAGATGGAGCATTGGATCCCCTCGAATCTCAGAGAGTCGTAGATCTTTTGAACACACACTTGTCACGCTTGCTCAAGTGCAAACCCAAGCAATTCTGGACACAAGTGGCGGCTGACATCTCCTTACATGAGTTTTTGGACAGCTTCTTGCAATTCAGAAGCAGGTGGTATGATTTCCCTCATCGCGGGGTGAAAGGGATTGTTGCAGGTGTTATTGTTGGGGAGCGCGATTTGAGTCGCCGCGTTTTCATGGTATTGTATCGCATTTCTTCGAATAAAGACCCTGGTGCTCGACCGGCCGATTCCCTCAGTTTGAGAGACCATGGAGTTCTTTTGCAGGAGAAAAAGTTGCTTGAATTGCCAAAGTTATTGGATATATGTGCCATATACTATCATGAAAATGAAGAACTGACAAGATCACTGGTCAGAAATGCCTTGAATGCTCAACCTTGGCTCCATAATAATCTGACTGCAGTAATATCCCATTTTCTAGGAATTGTCAGCACAATGCATGAACGTTGCAGTTCATCTTTGGAGGTTTTATTTTCTTCTGGAAATCTCGATCACCACAATGCTGCTTTTCTCCAAGCTGATCTGCTGGAGGTGATGGACTTTATAAATGATGCAATTGTATCAATGGATTCTTTTGTTGGTTCATACGGACCAGCAGCTGTATTCTTTTCTTGTCCAGTTGAAATGAGTTATGGGAATGAGGAACTGATGAGCCTCCTTGCGAGATTGCATGATTCACTAATTCCATCATTGCAAAAGGGATTCCGTATGATTTTTTCGGACAAACATGATGCCACATCATCTAATATATTGGTTAGTCTGAAGATGTTAAAAATAAGATTGGTAAAGTTTGGTTGGCAACTATTGCACTTGTGCTATCTAAGTGATGAAGTGTTCAGAGATAGCTTCCCTCTTCCAGCTGCCACTAAGATGTTTCCTGCCAATGTAGAGGACCCAGTCATCAGAGCAGATATTCTGGTTCAAACATTTCGAGATATCAATTCTGTATCAGCTCATTCTCGGGAAAGCCATCAGAAGGAAACATTTCTTCAAGATGTTGAAAGAAATTTCAATATACTGAGTAGGATTGATAGATTAAAGGATAGTGGATGGATATTCATTGATGATGAACAGTTTCAATATCTATCGGGGATGATGAGTTCTGTGAAAGAGATTTATAAGGACCCATATTCTGCTACAGCCCCTGTGCCAAACCAATCATTACTGACGGATGAAGATGCTGCAATTGCAGAGTCAAACATCAGTCAAATTAGGGACCTGTTCCCTGATTACGGTAAAGGATATTTAGCTGCGTGTCTTGAGGTTTATGACCAGAATCCAGAAGAGGTTATTCAAAGAATTTTAGAGGGAACCCTTCATGAAGATCTGCAGAACCTGGACACCTTGCTAGAGACATTGCCACCGGCCAAGCCTACCACCGTGGGTGGGAATGATAAAGGAAAAGGTAAATTAATTGATTCTACGTCAGCATCCTCAAATCCAGAAGTTGTCAGGGGGAAGCAACAGACGGAGGGGTCATTGATGTCATCCACTGCTTCACTAGGAAAATTTATAAGGAAATCTAAAGCTGACTTACCTGATCACAGTATTCTGGATAAAAAGGACGAGAAAGATACATCAAAAACTGCTGCTATGATTTTACAATATGAATATGAAGATGAGTATGACGACTCTTTTGATGACTTGGGTTTAAGTGTAGCGGACTCTGGATTAGAAGAAAATGAGACACTTGGTGCCCAAATAAATTCAAAATCAGGGAAATCGTGGGCAACAGAGAGTGGAAACTCTGTAAAAGATGTCCCTGATTCAAAATGGGGCTCTAGGAAAAAACCACAGTACTATGTCAAAGATGGTAAGAATTACAGCTACAAAGTGGCTGGTGCGGTAGCAGTTGCAAATTCTGATGAAGCTTCACTAGTAACGCTAGCGCAGAAAGAGTTAATACATGGCCTTGGACGAGGCGGAAACCTTCCTCTTGGCGCAGTAAAGAAGTTGACAGATTCCAACAAGGAGGATGATAACCAATTCCAGATTTCTGAAACGGAAGGCAGTGGGATTCCGGGCAAATCTTTTGGTAGGGGTAGGAAGGAAGGTGGTGGAAGACAGACTGTACCTCATCAGCAGCCTGTGCAACAATCTGATGATTCTGAGGCGGATGGGAATAACCAAATGGGTAGAGGAAGAGGTAGAGGGAGAGGGAGGGGCAGAGGAGGAGGAAGAAACAATCACCACCAGAAGGACCGATCCATGAAGAAGCACTTCTCTGGAATGAGCGGTTATTAA 2550 0.4341 MSNRSGQGGQDNNKKGFTKTHYHNNYVRKNPNPTLSTSLRQTQPSIPATTSGAPSRAQNGNFVKYLPQDEAVAAGLGAEDGALDPLESQRVVDLLNTHLSRLLKCKPKQFWTQVAADISLHEFLDSFLQFRSRWYDFPHRGVKGIVAGVIVGERDLSRRVFMVLYRISSNKDPGARPADSLSLRDHGVLLQEKKLLELPKLLDICAIYYHENEELTRSLVRNALNAQPWLHNNLTAVISHFLGIVSTMHERCSSSLEVLFSSGNLDHHNAAFLQADLLEVMDFINDAIVSMDSFVGSYGPAAVFFSCPVEMSYGNEELMSLLARLHDSLIPSLQKGFRMIFSDKHDATSSNILVSLKMLKIRLVKFGWQLLHLCYLSDEVFRDSFPLPAATKMFPANVEDPVIRADILVQTFRDINSVSAHSRESHQKETFLQDVERNFNILSRIDRLKDSGWIFIDDEQFQYLSGMMSSVKEIYKDPYSATAPVPNQSLLTDEDAAIAESNISQIRDLFPDYGKGYLAACLEVYDQNPEEVIQRILEGTLHEDLQNLDTLLETLPPAKPTTVGGNDKGKGKLIDSTSASSNPEVVRGKQQTEGSLMSSTASLGKFIRKSKADLPDHSILDKKDEKDTSKTAAMILQYEYEDEYDDSFDDLGLSVADSGLEENETLGAQINSKSGKSWATESGNSVKDVPDSKWGSRKKPQYYVKDGKNYSYKVAGAVAVANSDEASLVTLAQKELIHGLGRGGNLPLGAVKKLTDSNKEDDNQFQISETEGSGIPGKSFGRGRKEGGGRQTVPHQQPVQQSDDSEADGNNQMGRGRGRGRGRGRGGGRNNHHQKDRSMKKHFSGMSGY 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00517 849 CDD CUE_ASCC2 500 539 IPR041800 -
Phco7g00517 849 ProSiteProfiles CUE domain profile. 498 541 IPR003892 GO:0043130
Phco7g00517 849 MobiDBLite consensus disorder prediction 793 809 - -
Phco7g00517 849 MobiDBLite consensus disorder prediction 23 60 - -
Phco7g00517 849 Pfam CUE domain 500 540 IPR003892 GO:0043130
Phco7g00517 849 Gene3D - 499 541 - -
Phco7g00517 849 MobiDBLite consensus disorder prediction 671 698 - -
Phco7g00517 849 MobiDBLite consensus disorder prediction 818 839 - -
Phco7g00517 849 SMART cue_7 498 540 IPR003892 GO:0043130
Phco7g00517 849 MobiDBLite consensus disorder prediction 757 849 - -
Phco7g00517 849 SUPERFAMILY UBA-like 499 554 IPR009060 GO:0005515
Phco7g00517 849 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 19 848 - -
Phco7g00517 849 MobiDBLite consensus disorder prediction 556 594 - -
Phco7g00517 849 MobiDBLite consensus disorder prediction 573 594 - -
Phco7g00517 849 MobiDBLite consensus disorder prediction 671 689 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00517 7 3791285 3797311 Phco7g00517 7 3791285 3797311 ECH