Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00507 ATGAAGTCCCAAATGAAGAAAAAGAGAGTAACCCCTATTCCCAATACTCCTTGCAACATCAGCGATCAGCTTTGCATCAACCCGCGTTGCTTCTTCTGCAGCATGGGAGAACCAGATGCATCTCTCAGAAGGGCTGGAATAACGACCTGCTTCAAAGAACTATTTCAGGGAGAGAATCATGAGCAACACGTGTTGGTGCTGAGTGGACTATGGCACATCGCAATGAGCCAACCCAACGACCCAGAGTTCCCATCCCTCGGAATATTCAAGTACATGGCAAGTCTAATCCACAAAGGAATTAACGACAGGCACTGGCTTCTCGCAAATCAAAACATATACATACCCTATTACGCTGCTCATATCATTGGCTCATACACAATGAACAAGGAGGAGTTTGCACAGCTAGCCGTGCAATCAGGCGTGATACCCCCATTACTAGACTTGCTTAGGGGGAAGATCAGTTGGGTTGAGCAAAGAGTTGCTGTTAGAGCACTTGGTCACTTGGCCAGTTACAAAAGCACATTTGAATCAGTAGTACAGCACGAGCAAGAGGTAGTGAAGTTGACCTTGAACTTGGCTTCCACTTGTTTAGAAGTGGTCTATGTTGACTTCGTAGCTGTGAAGGAAAACAAAAGGCTCGAGTATCACAGAAACTTGCTTACTAGAGGGGTTGGGGATTTGGAGACGGAGAATCGCAAGGCAGAGGAATGGGCTAGCCAGCTTCAGTGTTGGTCTCTTTACCTTCTGAATTGCTTTGCTTGCAAAGATAGGGCTCTGGATCTCATATGCAAGAAGGGGTTTCTCAAGGACTTGTGCGATATGTGGGGAGGGTTGATAAATCACACGTCACCAGCAGGGGTTGGACTGATAAGAATCTTGTGTTATAGTAAAGAAGGAAGGAAAAACATTGCTGAGTTACCGAAAGTTGTGAACGCTTTAGGTAACCTTTCAAGATCTTCAGATGATTGGCAGTATATAGGTATCGATTGTCTTCTTCTCCTTCTCAAGGACCCAGATACGAGGTACAAAGTTCTTGATGTTACCGCTCCTTACCTCACTGATTTGATCGAACTTACAAACCTTGGAGATAAATCAAACGTGGGCGAGACCGTCACAAAGGTTCTTCTTAATTTGAAACCTAACATACAAAAGGTTGGAGCAGTATTGCAAGAAGTGATGGATTTGATGGTTGATAGGAGGAACAAGGAAAAGGTACTCTCGGAGGAAAAATTAGAGGAAACAAGGGTTTTGGTGAGTTTGATAAAGCAAGAAGCGAATCACAAGTTCAGGTTGGGAAAGGTGGAAGAAGCTTTAGTGAAATACTCTGAAGCGCTTGGTGTTTGTCCCTTGAAGTTTAGAAAAGAGAGAATGGTGATTTATAGTAACAAAGCTCAGTGTCATATTTTACTTAAGGACGCAGATTCAGCGATCAGTGACTCAACGCGTGCTCTTTGCCTATCCAACCCCGCAAACACCCATAGGAAAAGCCTTTGGAGAAGGTCGCAGGCATATGACATGAAAGGAATGGCCAAAGAGAGCCTCATGGACTGCATAATGTTCATGAACAGTAGCATCAAGTCGGGTGAAACCATGCGTGTCAAGATTCCATACCACCCTGCGCGCATGATCTGCAAGCACATGGATGCCACGTGGCTCTTTGCCACTGCTCGATCAAGGGTAGAAAAAACAATGCAAGAATTGAACCAAGTTGGCGGGCATGCTCAGAACCAAAAGCAACCACGTGATCATAAGGCCATGATGACGATGATGATACAAAAGAGAAACAGTCACATACACGGTCTGTCAACCATTATTGAAGAACCTTTTAACGCAAAAGAAGGTGGTAGGAGAAAGATGGAAAGGGCGAGAAGGAGATTGAAGAAAGGTAGATTCAGTTCTTCATTTATCCTAAACACTTCCCTCTATCAGATTCAAAACCCAAAAAAAGGAAAAAAGAAAATGAGTTGGTGGTGGGCTGGAGCAATCGGTGCTGCCAAGAAGAAATTCGAGGAAGATGAACCTCCGCGAAGCTTCGAGAGCGTGGGACTGGTGATTGGCGTGACGGGTATCGTCGGAAACAGCCTCGCCGAGATCCTGCCTCTCCATGACACCCCCGGTGGTCCATGGAAAGTCTACGGCGTGGCACGGAGGCCGCGGCCGTCGTGGAACGCCGATCACCCTATCGAGTATGTTCAGTGCGACGTCTCCGATCCCGCCGACGCCGAAAACAAGCTCTCCGTCTTGACCGACGTCACGCACGTTTTCTTCGTGTCGTGGACTAGCCGCCCCACCGAGGCCGAGAACTGCGAAGTTAACGGCGCGATGTTACGGAACGTGCTGCGCGCCGTTATCCCCAATGCTCCCAATCTGCGTCACGTGTCCCTCCAGACAGGCACCAAGCACTACATCGGATCGTTTGAATCCATTGGCAAGATCCAATCCCACGAGCCCCCCTTCACGGAGGATCTCCCGCGATTGGACACGCCTAATTTTTACTACACTCAAGAGGACATTCTCTTTGAAGAAACCGCTAAGAAAGAGGGTTTGACTTGGTCCATACACAGGCCCGGAACAATATTTGGCTTTTCTCCCTACAGTTTGATGAACCTGGTTGGGTCTATTTGCGTTTACGCCGCAATTTGCAAGCACGAGGGGGTTCCGTTGACATTTCCCGGTACGAAAGGCGCCTGGGAGGGTTATTCCTTTTCTTCCGATGCGGATTTGATTGCGGAGCAGCATATTTGGGCTGCTGTTGACCCCAATGCGCGGAATGAAGCATTTAACTGCTCCAATGGTGATGTGTTCAAGTGGAAGCATCTCTGGAAGGTGTTGGCTGAACAGTTTGGGATTGAGGAGTATGGTTTTGAAGAAGGTTCGCATTTGAAGCTGTCAGAAGTGATGAAGGATAAGGGTCCTGTTTGGGATGAGATTGTGAGTGCGAATCAGCTTCTGCCTACTAAACTTGACGAGGTTGGTGAATGGTGGTTTGTTGATATTATTTTCTCTGTGGCGGGAGTGTTAGATAGCATGAACAAGGCCAAAGAACATGGGTTTTTGGGATTCAGGAACTCCAAGAATTCGCTCATAAGTTGGATAGACAAGTGCAAGGGTTATAAGATTGTTCCTTGA 3129 0.4701 MKSQMKKKRVTPIPNTPCNISDQLCINPRCFFCSMGEPDASLRRAGITTCFKELFQGENHEQHVLVLSGLWHIAMSQPNDPEFPSLGIFKYMASLIHKGINDRHWLLANQNIYIPYYAAHIIGSYTMNKEEFAQLAVQSGVIPPLLDLLRGKISWVEQRVAVRALGHLASYKSTFESVVQHEQEVVKLTLNLASTCLEVVYVDFVAVKENKRLEYHRNLLTRGVGDLETENRKAEEWASQLQCWSLYLLNCFACKDRALDLICKKGFLKDLCDMWGGLINHTSPAGVGLIRILCYSKEGRKNIAELPKVVNALGNLSRSSDDWQYIGIDCLLLLLKDPDTRYKVLDVTAPYLTDLIELTNLGDKSNVGETVTKVLLNLKPNIQKVGAVLQEVMDLMVDRRNKEKVLSEEKLEETRVLVSLIKQEANHKFRLGKVEEALVKYSEALGVCPLKFRKERMVIYSNKAQCHILLKDADSAISDSTRALCLSNPANTHRKSLWRRSQAYDMKGMAKESLMDCIMFMNSSIKSGETMRVKIPYHPARMICKHMDATWLFATARSRVEKTMQELNQVGGHAQNQKQPRDHKAMMTMMIQKRNSHIHGLSTIIEEPFNAKEGGRRKMERARRRLKKGRFSSSFILNTSLYQIQNPKKGKKKMSWWWAGAIGAAKKKFEEDEPPRSFESVGLVIGVTGIVGNSLAEILPLHDTPGGPWKVYGVARRPRPSWNADHPIEYVQCDVSDPADAENKLSVLTDVTHVFFVSWTSRPTEAENCEVNGAMLRNVLRAVIPNAPNLRHVSLQTGTKHYIGSFESIGKIQSHEPPFTEDLPRLDTPNFYYTQEDILFEETAKKEGLTWSIHRPGTIFGFSPYSLMNLVGSICVYAAICKHEGVPLTFPGTKGAWEGYSFSSDADLIAEQHIWAAVDPNARNEAFNCSNGDVFKWKHLWKVLAEQFGIEEYGFEEGSHLKLSEVMKDKGPVWDEIVSANQLLPTKLDEVGEWWFVDIIFSVAGVLDSMNKAKEHGFLGFRNSKNSLISWIDKCKGYKIVP 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00507 1042 SUPERFAMILY TPR-like 419 517 IPR011990 GO:0005515
Phco7g00507 1042 CDD 5beta-POR_like_SDR_a 681 979 - -
Phco7g00507 1042 SMART arm_5 129 170 IPR000225 GO:0005515
Phco7g00507 1042 SUPERFAMILY ARM repeat 106 386 IPR016024 -
Phco7g00507 1042 Gene3D Tetratricopeptide repeat domain 417 534 IPR011990 GO:0005515
Phco7g00507 1042 Gene3D - 680 1042 - -
Phco7g00507 1042 FunFam Iridoid synthase 678 1042 - -
Phco7g00507 1042 Gene3D - 37 381 IPR011989 -
Phco7g00507 1042 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 21 616 - -
Phco7g00507 1042 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 683 951 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00507 Phco-Chr7 3713475 3722522 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00507 7 3713475 3722522 Phco7g00507 7 3713475 3722522 ECH