Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00504 ATGAGTGCTCCGTCGCGAGAAGAGGAGTCGAAGGAGAACGAAAGAGACGAGGAGGCGAACCGGCTTCTAGAGGAAGCAGGAGCGGCATCATCATCATTGGAAGAAGATGTGGCATACGAAGCGGGGGAGAAGATCCTGGTGGCGGATTTCGATTTTGACACGGTGGACGATGCGAGCGTTCCTCCTTTCTCATGGAAGAAGCTGTGGCTCTTCACTGGGCCTGGGTTCTTGATGAGCATAGCTTTTTTGGATCCGGGGAATCTCGAGGGGGATCTGCAGTCTGGGGCCATCGCGGGCTACTCGCTCCTCTGGCTCTTGATGTGGGCCACCTCCATGGGCCTCTTGATCCAGCTTTTGTCCGCCAGGGTCGGCGTCGCCACGGGCCGCCACCTCGCCGAGCTCTGCAGGGATGAATATCCCCATTGGGCCCGCCTTGTACTCTGGTTCATGGCCGAGCTGGCCCTGATTGGCGCCGACATTCAAGAGGTCATTGGAAGTGCCATCGCCATCCAAATTCTTAGCCGAGGCTTCTTCCCTCTCTGGGCAGGAGTTCTAATCACTGCTTCCGACTGCTTTTTCTTTCTATTTCTTGAGAACTATGGAGTGAGGAAGTTGGAAGCTGCTTTTGCAGTTCTTATTAGTGTTATGGGTCTTTCTTTTGCCTGGATGTTTGCTGATGCAAGACCTAATGGACAAGAACTTTTAATGGGTATTTTGGTTCCGAGACTAAGCTCAAAAACAATTCGTCAAGCTGTGGGTGTTGTGGGTTGTGTCATCATGCCTCACAATGTATTCCTGCATTCTGCTTTGGTTCAATCAAGGAAGGTTGATCCTAAAAAGAAAGGTCGGGTACAGGAGGCTCTCAACTACTATTCAATTGAGTCTTCAGCTGCACTTTCAATCTCCTTCATGATCAATCTATTTGTCACTACAGTTTTTGCTAAGGGTTTTTATGGAACAAAGCAGGCAAAACACATAGGACTAGTCAATGCAGGGCAGTATCTTGAACAAAAGTATGGAGGAGGAGTCTTCCCTATTCTTTATATATGGGGAATTGGGTTATTGGCAGCTGGCCAGAGCAGCACCATCACTGGCACATATGCTGGGCAATTCATAATGGGGGGCTTCCTCAACCTTCGTTTAAAGAAATGGATGAGAGCATTGATCACTCGAAGTTTTGCAATTGTGCCAACTATAATTGTAGCTATAGTTTTTAATAGATCAGAAGCCTCCTTGGACATTTTGAATGAATGGCTCAATGTGCTTCAGTCCATGCAAATTCCCTTTGCTCTGATTCCCCTCCTCACGTTGGTCTCCAAAGAGCAGGTTATGGGAACCTTTAGAGTTGGACCTGTTCTTGAGAGAGTAGCATGGACTGTTGCTGGACTGATAATAGTGATTAATGGGTATCTCTTGTTAGATTTCTTCATTTCTGAGGTGAATGGCATCTTGCTTGGTCTTTTAGCCTGCTCCTGCACGACAGCCTATGTTGCGTTCATTGTATATTTGGTTTCACAGAGCGGTATTCTTCCTTCCGCATGGGTTAAGCGTCTTCCCAAGGGATTTTCTTCAATTGGGAATTAA 1584 0.476 MSAPSREEESKENERDEEANRLLEEAGAASSSLEEDVAYEAGEKILVADFDFDTVDDASVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATSMGLLIQLLSARVGVATGRHLAELCRDEYPHWARLVLWFMAELALIGADIQEVIGSAIAIQILSRGFFPLWAGVLITASDCFFFLFLENYGVRKLEAAFAVLISVMGLSFAWMFADARPNGQELLMGILVPRLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSRKVDPKKKGRVQEALNYYSIESSAALSISFMINLFVTTVFAKGFYGTKQAKHIGLVNAGQYLEQKYGGGVFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSFAIVPTIIVAIVFNRSEASLDILNEWLNVLQSMQIPFALIPLLTLVSKEQVMGTFRVGPVLERVAWTVAGLIIVINGYLLLDFFISEVNGILLGLLACSCTTAYVAFIVYLVSQSGILPSAWVKRLPKGFSSIGN 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00504 527 NCBIfam Nramp family divalent metal transporter 73 442 - -
Phco7g00504 527 PRINTS Natural resistance-associated macrophage protein signature 177 196 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco7g00504 527 PRINTS Natural resistance-associated macrophage protein signature 386 403 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco7g00504 527 PRINTS Natural resistance-associated macrophage protein signature 202 223 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco7g00504 527 PRINTS Natural resistance-associated macrophage protein signature 251 274 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco7g00504 527 PRINTS Natural resistance-associated macrophage protein signature 420 439 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco7g00504 527 PRINTS Natural resistance-associated macrophage protein signature 147 173 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco7g00504 527 PRINTS Natural resistance-associated macrophage protein signature 358 377 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco7g00504 527 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 66 444 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco7g00504 527 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 21 505 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco7g00504 527 MobiDBLite consensus disorder prediction 1 34 - -
Phco7g00504 527 Pfam Natural resistance-associated macrophage protein 89 450 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco7g00504 527 MobiDBLite consensus disorder prediction 1 23 - -
Phco7g00504 527 Hamap Divalent metal cation transporter MntH [mntH]. 54 476 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco7g00504 527 Coils Coil 6 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00504 Phco-Chr7 3688942 3692104 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00504 7 3688942 3692104 Phco7g00504 7 3688942 3692104 ECH