Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00503 ATGGCTCTGTTACATCCACCCGTGCGCACTGCACCATCTCACCCTCACCGGTGGCAACATGCTTGGATGCTGCCTCCTCTCGCCATTTGGATTTGTGTTTCAGCCACACTCCGTTATGGGTATTACGGGGATTCCCTTATCCTGCTTGGTCCTGCCTCATCCCGTTTGATTAGAACCAGTTCTGTTTTTGTGAAGCAGCTTCAAGTGGCAAGCAAGGACAAAAATCAAGTCTTTCTTCACGCTTTCAATAAGAAGCCCGAGTTAAGCTCCCAAACTAATTGGACGACGTCGGATTTCTTCCTTGTTGAAGCATATAAAAGCAAGGGGATTTCTTTGTGGTTAAATCAGGGCTCCACCATCCGTATTAGGTGGGAAGAACATACCTCTCGTAGTTTGGATCAGCTACATGGAATGGTGATTAAAGGAGACATGAAGTTTGAACTACCACAGGCTCCACAAACGAGCTTCCTCAATGCAATTTCTCTTCGAGAGACTGTTCATGGTAAAGAAGCTGAATACATGGTTGAGGAAGATGATAGATACCACATTGGGGTTCTAAACATGAATGCAAGGAACATAATCTTGAATATGGAAGTTAATGTTTCAGCAAAGGTATATGATACCACCAAAGCCAAGAAGATGTGCTCCAGTGAAAATGGACCTTGTAGGCTCAGTTTTTTCTTCCCTAATACATATTATGTTATTCTTACGGCAACCAACAATGGAGATGGGTTATCGTATGTTGAAATTTCTTTAGTGGTCCGTGTGTTTGTCTACATATTACTTCTGGGAGTTATTGTGATTGCTGTTTATCTGATTCTGAAAGTCCTTGGAGTTTATGATGACGCTGAGCAGCATAGTCATGTTACAATCGATGTTACATACAGAACAAGTAATTTAGTTGCAACACAGACCGAGACTGAGCCCTTGATGCGAGTGGAGGCAAATCGAAAGTCATATGGAACAAATGCAAAAGACGATGAAGAGAATTCAGTAGCATATAGTAGCTCTTCAGAGGAGTTATATGATGAAAAATTATGTTGCATTTGTTATGATGAACAACGCAGCAGCTTCTTTGTTCCTTGTGGACATTGTGCCACTTGCTATGACTGTGCACAGAGGATTATCGATGGGGAGAGCAAAGTCTGTCCTATATGCCGAAGGCTTATTCACAAAGTACGAAGATTATTTCACATTTAG 1200 0.42 MALLHPPVRTAPSHPHRWQHAWMLPPLAIWICVSATLRYGYYGDSLILLGPASSRLIRTSSVFVKQLQVASKDKNQVFLHAFNKKPELSSQTNWTTSDFFLVEAYKSKGISLWLNQGSTIRIRWEEHTSRSLDQLHGMVIKGDMKFELPQAPQTSFLNAISLRETVHGKEAEYMVEEDDRYHIGVLNMNARNIILNMEVNVSAKVYDTTKAKKMCSSENGPCRLSFFFPNTYYVILTATNNGDGLSYVEISLVVRVFVYILLLGVIVIAVYLILKVLGVYDDAEQHSHVTIDVTYRTSNLVATQTETEPLMRVEANRKSYGTNAKDDEENSVAYSSSSEELYDEKLCCICYDEQRSSFFVPCGHCATCYDCAQRIIDGESKVCPICRRLIHKVRRLFHI 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00503 399 PANTHER OS05G0521000 PROTEIN 27 397 - -
Phco7g00503 399 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 321 398 IPR013083 -
Phco7g00503 399 Pfam Domain of unknown function (DUF4793) 171 272 IPR032010 -
Phco7g00503 399 SUPERFAMILY RING/U-box 335 393 - -
Phco7g00503 399 ProSiteProfiles Zinc finger RING-type profile. 347 387 IPR001841 -
Phco7g00503 399 Pfam Domain of unknown function (DUF4792) 79 146 IPR032008 -
Phco7g00503 399 Pfam Zinc finger, C3HC4 type (RING finger) 344 393 - -
Phco7g00503 399 SMART ring_2 347 386 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00503 Phco-Chr7 3681070 3683373 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00503 7 3681070 3683373 Phco7g00503 7 3681070 3683373 ECH