Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00499 ATGGAGACTCGGGCTGCGGCAAAGAGAAAGAAGGAAAGTGTTGTGGTGGTGGAAAAGCAGCACCCCAAGAAGCATAGGGTTGTATTGGGTGAACTCTCCAATTTACCAAACCTTATTGTCCCCAAAACTCAAGATCTGAGCAAACAGAAACGGCAGTGTCTGGAAAACTCCAATTTCAAGAAACTATCTTCCCTAAATAATACCCTTTCTTCTCTCCAGATTGACCAACAGTATGTTTCCGACATCAATGAGTATCTTCGTGCAATGGAGATCCAGACAAAGAGAAGACCAATGGTTAATTACATGGACAAAGTTCAGTTGGTAGTTACCACAAACATGAGAGAAATATTGGTGGATTGGTTAGTAGATGTTGCCGAGGAGTACAAGCTTCTCTCTGAAACTCTTCATCTCTCTGTGTCATATATAGATAGGTTTTTATCTGTCAGTCCTGTGACCAAATCGAGGCTTCAGTTACTCGGTGTTTCTTCTATGCTCATTGCTTCGAAGTACGAGGAAACTAATCCACCCCGTGTGGAGAAATTTTGCAGCATCACTGATAACACTTATGAAAAAAAAGAAGTTGTAAAGATGGAAGCTGAAATACTCCAGTCCCTAAACTTTGAAATGGGCAATCCTACTGCAATCACCTTTCTAAAGTATGAACTTTATACTGAAATGGGAATATCTAACTTCTTTGGAATGAAATTAATTGGACTAAATGGGTATGATTATTGTTTCAGGAGGTTTTTGGGTGTTGCTTCTGTGAATCAAAAAACGCCAAATTTGAAGGTTGAGTTTCTGAGCTTCTACCTTGCTGAGCTAAGTTTGTTGGATTATGATTGTATAAGATTCTTGCCTTCTATTGTGGCAGCATCTGCATTATTTCTTGCCAGTTTTATTATCTCCCCTGAAGTGCATCCTTGGACTTCTTCCCTGCGTGAATGGTCAGGTTACAAACCAGTTGAGTTGAAAGTTTGTGTTCTCACTTTGCATGACTTGTATTTTTCAAGAAAGGCATCATCTTTCCGATCTGTTAGGGATAAATATAAGCAGCACAAGTTCAAGTATGTGGCAAACCTACCGTCTCCTCCACACGTACCAAGTTATTACTTTGAAGATTAG 1122 0.3975 METRAAAKRKKESVVVVEKQHPKKHRVVLGELSNLPNLIVPKTQDLSKQKRQCLENSNFKKLSSLNNTLSSLQIDQQYVSDINEYLRAMEIQTKRRPMVNYMDKVQLVVTTNMREILVDWLVDVAEEYKLLSETLHLSVSYIDRFLSVSPVTKSRLQLLGVSSMLIASKYEETNPPRVEKFCSITDNTYEKKEVVKMEAEILQSLNFEMGNPTAITFLKYELYTEMGISNFFGMKLIGLNGYDYCFRRFLGVASVNQKTPNLKVEFLSFYLAELSLLDYDCIRFLPSIVAASALFLASFIISPEVHPWTSSLREWSGYKPVELKVCVLTLHDLYFSRKASSFRSVRDKYKQHKFKYVANLPSPPHVPSYYFED 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00499 373 Gene3D - 81 359 - -
Phco7g00499 373 PANTHER CYCLINS 51 351 IPR039361 -
Phco7g00499 373 SUPERFAMILY Cyclin-like 259 365 IPR036915 -
Phco7g00499 373 Pfam Cyclin, C-terminal domain 246 362 IPR004367 -
Phco7g00499 373 Gene3D - 95 210 - -
Phco7g00499 373 PIRSF Cyclin_A_B_D_E 243 369 IPR046965 GO:0016538|GO:0044772
Phco7g00499 373 PIRSF Cyclin_A_B_D_E 1 229 IPR046965 GO:0016538|GO:0044772
Phco7g00499 373 FunFam Cyclin A1 240 359 - -
Phco7g00499 373 Pfam Cyclin, N-terminal domain 81 209 IPR006671 -
Phco7g00499 373 ProSitePatterns Cyclins signature. 114 145 IPR006671 -
Phco7g00499 373 FunFam G2/mitotic-specific cyclin 97 210 - -
Phco7g00499 373 SMART Cyclin_C_2 212 363 IPR004367 -
Phco7g00499 373 SUPERFAMILY Cyclin-like 73 209 IPR036915 -
Phco7g00499 373 SMART cyclin_7 248 332 IPR013763 -
Phco7g00499 373 SMART cyclin_7 119 203 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00499 Phco-Chr7 3663982 3665615 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00499 7 3663982 3665615 Phco7g00499 7 3663982 3665615 ECH