Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00446 ATGCAAACGGTGGGGAGAATACTGAGTCAGGGCGTGTATACGGTTTCGGGCCCGTTTCATCCGTTCGGTGGCGCCGTCGATATTGTGGTGGTGGAACAGCAAGATGGAAGTTTCAAGTCCTCGCCCTGGTACGTTCGATTCGGCAAATTCCAGGGGGTTTTGAAGTCGAGGGAAAAGGTGATTGATATCTCTGTCAATGGGGTGCGTGCTGGTTTCCAAATGCATCTCGATCATAAGGGGGAAGCTTACTTTCTCAGGGAAATCGTTGCACAAGAAGAAGACAATTTGATATTTCCGTCTTCTTCGTCTCCTTCTAGCGATGCTAAAAGTGATCACTCTCGCAGGTCCAGGAGTTGCGATTATGATAGTGGACAGGATGTGGGAAAGACTGGTTCTCGCCGTTCCAGAATACTTGGCTTTGTGTTTGGGAGGAGGTCTTTGAAGCAGAGAGAGGGTAACGGTGATGGGATTGGGAACAGGGTAGGTTCGTTGGAGCGTGCTGAGATTGCGGCTAACTTGTTAGACCTCAAGTGGTCCACTAATCTCTCCGGGGAACAAGGGCAAGAGGTTCTTGCTACCTCGTCTGGGGATGGTAACATGGTCGTGAACGATGGTGAGTTGAAAGAGGGAGCTTGTCTTGGTCGTGAGTGTGACTTGAATGGGAAGGAAGTTGTGTATGATATTGCAGAGTCTGACGTGCAAGTTGCGTGCGTGAAGGTGAAGCTTGTGGAAAAGGAATTGAGTGGAGAAGAAGTTTCTGGTGTGAGCACTGTTGATACATCGGGTGATAATAGTAATGATATTTCCAAAGAGGATGTTTCGGCTGATGGGGTTTGCCGTGAAACACCAGAGACTTCCAAGTTGGGCGTGTCTTGTTCTAGTGAACACGCTCAAGAGGTGGTGTACCTTGCAGGCGCAGCAGGATGTGAAGAAGTCCGCGTCCATGTCCATGATGAAGTCTTGCATCGTGCAACTGTACTGCTATCTGAGGGTACACAAGCTGTGGAAGTTATTGAGAAAGCTGATCTTGGGATGCCGGTACTGGGGATCTCTGAGTTCCATTCTGGGGTTCAACAAGTAGAATGTTTGGATTCTGGTGATATTATGTATAATGAGGTGGATATTGAAGAGCAATCAATATCTCCAAAATCTCAAACTTTTAGCCTAGGACATTGTTCAGGTGAGAAAGTTGAGCCCAATTGCTTAATCAAACCTTCCAGCTACAGCATTCTGCATGACCAAGCCTTAAGCGAGAATATGATGCAGAAGGACGTCTCCACCTCATTATCGACTCCTCTGGACTATGTTGATGATTGTTTACCTAGAAAAGCATCAAGGAGATCACCATCACCAAGTTCAGAGGATCAAAATTTCCTTTTCACTGACCTTGATGAAATTGAAATCAATGATCGATCCGAGAGAACACACTTCCCTGAACATTTAGATAAAGAAGATCGTGTTTCGTATGAGGATGACACTGAAAAGTTAACAGCAATATCCGGTCCTATAGTCATTCGTAGAAATGAAGCTGCTGGAGAGAAAGTTGGGCAACATTCGGGATCCTTGCCAAATCTTTCTTCTGGTAGTGACATTGTGGTCCAACATGATGTTCGTTATCCTTTAAGTCAATCACTGGACTCAAGATCAAAATCCTTGCCATGTGAATTTCCTCGAAAAGATGATTTAGAATGTCAAAAACCGGATGAAGACAAAGGAAACCACCTAACACCCGAGGAGTCAGGTGCCAAGGATTATCATGATTCTGGGGAAATCAAAGGAGATGATCCATCAACACACAACCCTTCCCCTGCTGGAAACTGGAGACTTTGGCCTTTCTCCTTGAGGAGAACAGGATCTAAAGATTCTATGTTGCCGCCTTCTCTAAGTGATGTCAAAACCACTACTGATGGTAATTGTCTACAGAATACGATTAGCACAGCTATAAACAAAGATAAACCCAAACCCAATTTTAAAAAAATAAAGGTTAGGGAAACAACTCCAACTTCTGAACAGGTAGCCTCCTTGAATCTGAAGGATGGGATGAATACTGTAACCTTCACTTTCTCTACAGCTGTGCTGGGGAATCAGCAGGTTGATGCTCGAATATATCTGTGGAAATGGAATACTCGCATAGTGATCTCTGATGTAGATGGTACAATTACAAGGTCGGATGTTCTTGGTCAGTTCATGCCTTTGGTTGGTATTGACTGGTCACAGACAGGTGTGGCACATTTATTCTCGGCTATTAAGGAGAATGGTTACCAACTTCTTTTTCTCAGTGCTCGTTCAATTTCTCAGGCCTACCTTACCCGACAATTCCTTGTTAATCTTAAACAGGATGGAAAAGTTTTACCAGATGGGCCTGTTGTTATTTCTCCTGATGGACTTTTTCCCTCTCTATATCGGGAAGTTATTAGGAGGGTTCCCCACGAATTCAAAATTGCATGCTTAGAGGTCATCAAGGATCTTTTTCCTTCTGATTGCAATCCTTTCTATGCTGGTTTTGGTAATAGGGATACGGATGAAATCAGCTACCTTAAGGTTGGAATCCCCTTGGGAAAAATCTTCATAATTAATCCCAGGGGAGAGGTTGTTGTAAACCGTCGCGTTGACGCAAAATCATATGCTTCTCTGCATGCTCTCGTGAATGGGATATTCCCCCCTCCGAACTCTTCTGAACAGGAGGACTTTAATTCATGGAATTTTTGGAAGCTACCCCCTCCTGCTATAGATATTTGA 2739 0.4443 MQTVGRILSQGVYTVSGPFHPFGGAVDIVVVEQQDGSFKSSPWYVRFGKFQGVLKSREKVIDISVNGVRAGFQMHLDHKGEAYFLREIVAQEEDNLIFPSSSSPSSDAKSDHSRRSRSCDYDSGQDVGKTGSRRSRILGFVFGRRSLKQREGNGDGIGNRVGSLERAEIAANLLDLKWSTNLSGEQGQEVLATSSGDGNMVVNDGELKEGACLGRECDLNGKEVVYDIAESDVQVACVKVKLVEKELSGEEVSGVSTVDTSGDNSNDISKEDVSADGVCRETPETSKLGVSCSSEHAQEVVYLAGAAGCEEVRVHVHDEVLHRATVLLSEGTQAVEVIEKADLGMPVLGISEFHSGVQQVECLDSGDIMYNEVDIEEQSISPKSQTFSLGHCSGEKVEPNCLIKPSSYSILHDQALSENMMQKDVSTSLSTPLDYVDDCLPRKASRRSPSPSSEDQNFLFTDLDEIEINDRSERTHFPEHLDKEDRVSYEDDTEKLTAISGPIVIRRNEAAGEKVGQHSGSLPNLSSGSDIVVQHDVRYPLSQSLDSRSKSLPCEFPRKDDLECQKPDEDKGNHLTPEESGAKDYHDSGEIKGDDPSTHNPSPAGNWRLWPFSLRRTGSKDSMLPPSLSDVKTTTDGNCLQNTISTAINKDKPKPNFKKIKVRETTPTSEQVASLNLKDGMNTVTFTFSTAVLGNQQVDARIYLWKWNTRIVISDVDGTITRSDVLGQFMPLVGIDWSQTGVAHLFSAIKENGYQLLFLSARSISQAYLTRQFLVNLKQDGKVLPDGPVVISPDGLFPSLYREVIRRVPHEFKIACLEVIKDLFPSDCNPFYAGFGNRDTDEISYLKVGIPLGKIFIINPRGEVVVNRRVDAKSYASLHALVNGIFPPPNSSEQEDFNSWNFWKLPPPAIDI 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00446 912 MobiDBLite consensus disorder prediction 253 277 - -
Phco7g00446 912 MobiDBLite consensus disorder prediction 441 461 - -
Phco7g00446 912 MobiDBLite consensus disorder prediction 552 594 - -
Phco7g00446 912 MobiDBLite consensus disorder prediction 544 607 - -
Phco7g00446 912 PANTHER LIPIN 1 911 IPR026058 -
Phco7g00446 912 MobiDBLite consensus disorder prediction 98 130 - -
Phco7g00446 912 Pfam lipin, N-terminal conserved region 1 93 IPR007651 -
Phco7g00446 912 SUPERFAMILY HAD-like 703 855 IPR036412 -
Phco7g00446 912 SMART lns2 711 867 IPR031315 -
Phco7g00446 912 MobiDBLite consensus disorder prediction 108 122 - -
Phco7g00446 912 MobiDBLite consensus disorder prediction 470 489 - -
Phco7g00446 912 Pfam LNS2 (Lipin/Ned1/Smp2) 665 887 IPR013209 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00446 Phco-Chr7 3194041 3201131 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00446 7 3194041 3201131 Phco7g00446 7 3194041 3201131 ECH