Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00377 ATGGCGGCGGAGATACCGTGCTGCGGAACAAAGTTCTCATTGTACGTGTTGGTGATCGTAGGATTAGTCTGCTTCGCGGGCCTAATGGCTGGTCTCACTCTCGGACTCATGTCTCTTGGACTCGTCGACCTCGAAGTTCTCATGAAATCTGGCCGTCCTCAGGATAAAATTTACGCTTCTAAAATTTATCCAGTGGTTAAGAACCAGCATCTTCTGCTTTGCACGCTTCTAATTGGAAACTCCTTAGCCATGGAGGCTCTCCCCATTTTTCTTGATTCGCTGGTGCATCCTGCTGCTGCAATCTTGATTTCGGTCACTCTCATCCTCCTGTTTGGAGAGATATTGCCGCAAGCAATTTGCACAAGATATGGATTAACAGTTGGAGCAACGCTGGCTCCATTTGTTCGTGTTCTTCTTCTTGTTTTCTACCCCGTTTCTTATCCAATCAGCAAGGTTCTTGATTGGATGTTGGGTAAAGGACATGCTGCCCTTTTGAAGAGGGCAGAGCTCAAGACTTTTGTGAATTTTCATGGAAATGAGGCCGGTAAAGGAGGAGATTTAACTCATGACGAAACGACCATCATTACTGGGGCACTTGAGTTGACAGAAAAGACTGCAAAAGATGCCATGACTCCCATATCAAAGGCATTTTCCCTTGATCTGGATGCAACTCTAAATTTGGAGACACTGAATTCCATAATGACAATTGGTCATAGTAGAGTTCCAGTTTATGCAGGAGAAAAAACTAATATTATTGGACTTGTTCTGGTGAAAAATCTCTTTATGGTTGATTCAAAGGCTGCAGTTCCTCTAAGAAAAATGGTCATCAGAAAAATTCCTCGTGTTTCAGAGAACATGCCTCTGTATGATATACTGAACGAATTTCAGAAGGGTCACAGTCATATTGCAGTAGTGTATAAGGATCTAAACGGTAAAAACGAGGCCCCAAAAAAGGTCAAAGATGGGGAACAACATGACAGGAACAACTATAAGAATAAGGGAGAGAATGCACCCTTGGATAAAGGTTCTAAATTGGAGTCAGGTGATACTTTGACTACTGTTACTAAGATTGATGGTGCTCAAGCAAAGAAAAGTCCACCAGCAACTCCTGCTTTTAAAAAGCGACATAGAGGTTGTTCATATTGCATCCTGGACCTTGATAATGCGCCCCTGCCAGTATTTCCACCCAATGAAGTGGTTGTTGGTGTTATTACAATGGAGGATGTCATCGAAGAGCTTCTTCAGGAGGAGATATTAGATGAAACTGACGAATATGTCAATATCCATAACAAGATAAAAGTTAACATGAATGCTACAAAGGAGAAGGCTTCTGATGCAAATCTGTTTCAACCTTCTCAAGCGGTTCAAGGACATACACCAACTAATTCAATTTCTACAGCTACCTCTGCAACAGGCTCACCTACCACAATCGATCTAATCTCTGAAAGTGAGTCACTAAGGAATCAATAG 1470 0.4224 MAAEIPCCGTKFSLYVLVIVGLVCFAGLMAGLTLGLMSLGLVDLEVLMKSGRPQDKIYASKIYPVVKNQHLLLCTLLIGNSLAMEALPIFLDSLVHPAAAILISVTLILLFGEILPQAICTRYGLTVGATLAPFVRVLLLVFYPVSYPISKVLDWMLGKGHAALLKRAELKTFVNFHGNEAGKGGDLTHDETTIITGALELTEKTAKDAMTPISKAFSLDLDATLNLETLNSIMTIGHSRVPVYAGEKTNIIGLVLVKNLFMVDSKAAVPLRKMVIRKIPRVSENMPLYDILNEFQKGHSHIAVVYKDLNGKNEAPKKVKDGEQHDRNNYKNKGENAPLDKGSKLESGDTLTTVTKIDGAQAKKSPPATPAFKKRHRGCSYCILDLDNAPLPVFPPNEVVVGVITMEDVIEELLQEEILDETDEYVNIHNKIKVNMNATKEKASDANLFQPSQAVQGHTPTNSISTATSATGSPTTIDLISESESLRNQ 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00377 489 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Phco7g00377 489 Pfam Cyclin M transmembrane N-terminal domain 18 189 IPR002550 -
Phco7g00377 489 SUPERFAMILY CBS-domain pair 195 415 IPR046342 -
Phco7g00377 489 Gene3D - 381 421 IPR046342 -
Phco7g00377 489 Gene3D - 189 324 IPR046342 -
Phco7g00377 489 MobiDBLite consensus disorder prediction 453 489 - -
Phco7g00377 489 PANTHER METAL TRANSPORTER CNNM 3 454 IPR045095 GO:0010960
Phco7g00377 489 MobiDBLite consensus disorder prediction 313 345 - -
Phco7g00377 489 FunFam DUF21 domain-containing protein 189 324 - -
Phco7g00377 489 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Phco7g00377 489 MobiDBLite consensus disorder prediction 313 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00377 Phco-Chr7 2638052 2642241 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00377 7 2638052 2642241 Phco7g00377 7 2638052 2642241 ECH