Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00322 ATGGGAGCTCTGGCTACATTAGCCCCTTGGATTCCCGAGGACGATCTTTTGCTCAAGAACGCCGTTGAGGCTGGTGCTTCACTAGAATCACTTGCCAAAGGTGCAGTGCAATTTTCTCGAAAATATAGTATCAGGGAGATACAAGATAGGTGGTATTCTCTCCTCTATGATCCTGTCATTTCTGCAGAAGCTTCTGCGGGTATGACAAACTTTGAGCTTTCAGCTTCGCCTCTCCCGTCCAAGTTTTACAGGTTTGGACATTCCAGAGAACAGAAAGTTGTTTCAGCTAATAGGAAGTCTGGAAGTGTTCGCAATTTGTATTATGCAAGGCGCAAAAGAATTCGCAATAGCATGTTAACTTCCATGGACTTAAGTTTTCTAGTTGATCCGGGAAATGGTAATTATGCAGAGCATGGAAGTGACCCCTTGTCTGGAAACTGCATGACTGAAGGTGAAACTTTAAATCTCCCTGCTGACTATGATTTTCCTCCTGAAAATGTAGCTTCTGATGGAGTTACTGCCAGTGTGTTTTTCTCTGGAGTTGACAGTGCAGTTGAAGAGAATTTGCCTGCCAGGCAAAATAATGTACTTAAGGAAGAACCTCAATTTATTGGAGACAACGTTCCTTTGGATGAAGCTGTTGACGAATTGGATGTTCCCGGAGAATTGACTATTGATGGGTGGATTGGTGACGATAATTTAGAGAGAATACCCTTGCCCACATTGGATCACATCAACAATGACCCTGGAAACATGTGTCCTGATTTTGATGAAAAAAATGCATTTGATACAACCGAGTTAGAGTGTGGAACTTCATTTAACTTAGCCTCACTTCCTGAAATACCAGTCTGGAATACAGATGAGGGCATCAAAGAACGTGATATGCCATGTGATGGTTTTAATGATTCGATTGCGTGTGGGGAGGCTTATTTGGAAGAACTGTCCAATTCTCTCCTCAACTTCAGTAGTGAGGAAGAGCTCTTTCTGATGGATGTTGATGGAGAAGAAGGGATTGACAAATCTTACTTTGATGGTCTGAGTTCGCTCCTACTAAATTCTACAAATGATGTTAATCCAAGTGAAGTCCCTAAAAAGGATGAAACTGAGTCGCAGGTCCCTAAAATGGATGGACCAGAGTCGTTAATTGCCTCACAGGCACATGTTCTAAACCAGTCGGTTTCATGTCACAAAGAGGTAGAAGACAACCCAGGGTCAACCTCTAGTAGTGTACAAGTGGTTCACAAATTAGAGTTCCATATTTCATCTCCTCCCTTGGCTGAAGACCCCCTCTTTCATGGACTAACTAATGAAGTTCCTTCCTGTTCCCTAAACACTGAGGAACAAGAAATTCCAGATAACGAAGATGTTTTCCTACCGTTTGATGTGCCTCCTGTTATATTTCCCCCTTCATCTAAACTGATTTTTAAAGCATCCAAGAAACCAATGTCATCGTGTGTTCAGGATTATGGATTTAATAAGCATAGAGCTACTGAAAGAGGTAAAACCTTGATGCATGTAGAGAAGAAAATCTGTGTAGAATCTCAATCATCTTCTCAGATGATGGGATCTCCTTGCTTCCTGGGACCTGATGGTGGTTCTAAGGTAAAATGCGAGTTACCTGCTAATCATGCATCACACATAGTATCTACCAGTTCTGTTGCTGTTTCTGGTGGCTTAGGTGGAAATGATGCTGCGAACACTACAAATGCTCTTCTGCGTGCAAATAAAAAGGAAGAAGCTACCAATGCTGACTTGGCAAAGGATCAAAGCAATCATATGGCAAATCCTTTCAGTAAGAAATCAGCAGCTAGTTCTAACGACTTGCGAAATCATTTCCAACTTCATGGTTCTAGCATGAAGAATGAAGAAGATTTAGGTTTGCCACTTCAAGATAACCAGCTGAAATGTGCTGAAGTTGGATCCTCAGATGTTATTGAGTCAGAGATGGTGGCAGATCCTCTAACATTAGACGAGGAAGAGCAATATATAGAGAGTGACGATGAACTTCCTTCTTATTCTGACGTAGAAGCAATGGTACTTGATATGGACTTGGATCCTGATGATCATCTGGATTCTTCTAATAATGAGGAAGTATCAAGATATCAACATGTGGAAAGTAAGCGAGCTATCATGAGGCTGGAACAGGGTGCCCATTCTTGTATTCAGAGAGCCATTGATGCACATGGAGCATTTGCCATTTTATATGGTCGCCACTCAAAGCATTATATTAAGAAACCTGAGGTTCTACTTGGAAGAGCGACGGAAGGTTTCCCTGTAGACATTGACTTGAGCAAAGGAGGGTATAGCAATTCAATATCTCGACGTCAGGCAATTATCAAGATGGATAAAGAGGGGTCATTCTACATCAAAAACTTCGGCAAGAGTTCAATCCTGGTAAATAGCAAAGAAGTGCAAACTGGTCAGTCTCAAAGACTGCATACCAATTATCTAATTGAGGTGAGGGGCATACCTTTGATATTTGAGATAAATCAAAATCGTGTGAAGCGGTACCTGGATCACATTTCCTGA 2529 0.4164 MGALATLAPWIPEDDLLLKNAVEAGASLESLAKGAVQFSRKYSIREIQDRWYSLLYDPVISAEASAGMTNFELSASPLPSKFYRFGHSREQKVVSANRKSGSVRNLYYARRKRIRNSMLTSMDLSFLVDPGNGNYAEHGSDPLSGNCMTEGETLNLPADYDFPPENVASDGVTASVFFSGVDSAVEENLPARQNNVLKEEPQFIGDNVPLDEAVDELDVPGELTIDGWIGDDNLERIPLPTLDHINNDPGNMCPDFDEKNAFDTTELECGTSFNLASLPEIPVWNTDEGIKERDMPCDGFNDSIACGEAYLEELSNSLLNFSSEEELFLMDVDGEEGIDKSYFDGLSSLLLNSTNDVNPSEVPKKDETESQVPKMDGPESLIASQAHVLNQSVSCHKEVEDNPGSTSSSVQVVHKLEFHISSPPLAEDPLFHGLTNEVPSCSLNTEEQEIPDNEDVFLPFDVPPVIFPPSSKLIFKASKKPMSSCVQDYGFNKHRATERGKTLMHVEKKICVESQSSSQMMGSPCFLGPDGGSKVKCELPANHASHIVSTSSVAVSGGLGGNDAANTTNALLRANKKEEATNADLAKDQSNHMANPFSKKSAASSNDLRNHFQLHGSSMKNEEDLGLPLQDNQLKCAEVGSSDVIESEMVADPLTLDEEEQYIESDDELPSYSDVEAMVLDMDLDPDDHLDSSNNEEVSRYQHVESKRAIMRLEQGAHSCIQRAIDAHGAFAILYGRHSKHYIKKPEVLLGRATEGFPVDIDLSKGGYSNSISRRQAIIKMDKEGSFYIKNFGKSSILVNSKEVQTGQSQRLHTNYLIEVRGIPLIFEINQNRVKRYLDHIS 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00322 842 SMART FHA_2 747 804 IPR000253 GO:0005515
Phco7g00322 842 SUPERFAMILY SMAD/FHA domain 727 830 IPR008984 GO:0005515
Phco7g00322 842 Pfam FHA domain 749 819 IPR000253 GO:0005515
Phco7g00322 842 ProSiteProfiles Forkhead-associated (FHA) domain profile. 748 804 IPR000253 GO:0005515
Phco7g00322 842 MobiDBLite consensus disorder prediction 354 374 - -
Phco7g00322 842 Gene3D - 691 838 - -
Phco7g00322 842 PANTHER MICROSPHERULE PROTEIN 1 7 841 IPR037912 GO:0002151|GO:0031011|GO:0071339
Phco7g00322 842 CDD FHA_MCRS1 726 830 - -
Phco7g00322 842 FunFam Microspherule protein 1 691 840 - -
Phco7g00322 842 Pfam N-terminal region of micro-spherule protein 10 72 IPR025999 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00322 Phco-Chr7 2273571 2278938 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00322 7 2273571 2278938 Phco7g00322 7 2273571 2278938 ECH