Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00314 ATGAGTAGAAGACCACCTCCTGATCCCATGGCAGTGCTACGAGGCCATCGAGCTTCAGTCACAGACATTTCTTTTCATCCTGTTAAGCCGATATTATTCTCCAGTTCTGCCGATGGTGAAGTGCGAATTTGGGATACTCTTCAGCATCGAACCGTGTCATCTGCATGGTTACATAGTGCTGCACATGGTATTGTTGCTGTTGCCTGTGGTTCTTCCCTCGGAACCAATAAATTTGCCAGCCAGGGTAGGGATGGAACTGTAAAAATTTGGGAATTTGATGATGCTGGTTTGTCAAGGATCCCATCACTTACAATCAAGACAAACAGTTACCACTTTTGCAAATTTTCCATGTTGAAGAATGATTCTGTTTGGTCAACAGAAGGGAAGGAATCGGAAGATTGCCACAGAACAGAGCCAGGAGGAATGTCTGATAGAGAAATTCTGGAGGCTAAAAGAGACGAGGCTAACACCAATCAAAGTTGTTCTAAAAGCTTTGGAGAAAATACATATAATGAAGGGCTACAATATGTGGCTTTGTCAGGGGAGAACTCTTCAGAGGTTGAAATTTGGGATCTCAAGTCAGCTCAAAAAATTGTACAACTCCCATCAAGCAATCCCAGTGACTCTTCAAGTGCTTGCAAAAAAGGGATGTGCATGGCACTTCAATTGTTTTTATCATCTGAATCACAAGGACTTTTAAATGTCTTGGCTGGATATGAGGATGGTTCCATGCTTTGGTGGGATATACGGAATCCTAGAGTTCCAGTAACTTCTGTAAAATTTCATTCTGAGCCAGTTCTGAGCATCTGTACTGACGGGTCTTGCAAAGGGGGTATCTCAGGAGCTGCTGATGACAAAATTGTAATGTACAGCTTGGATCATTCTTCGGGTACATGTATAGTGAAGAAAGAAATCAGTTTGGAGCGACCAGGCATATCAGGCATCTCTATTCGACCTGATGGAAAAATTGCGGCAACTGCTGGCTGGGATCACAGGGTGAGGATATATAATTACCGCAAGGGAAATCCATTAGCTATTTTGAAGTATCACCATGGCACATGCAATGCTGTAACTTATTCCTCTGATTGTAAACTTATGGCCTCTGCATCGGAAGACACAACAGTGGGGCTATGGGAATTGTATCCTCCTCTAATATGA 1158 0.4292 MSRRPPPDPMAVLRGHRASVTDISFHPVKPILFSSSADGEVRIWDTLQHRTVSSAWLHSAAHGIVAVACGSSLGTNKFASQGRDGTVKIWEFDDAGLSRIPSLTIKTNSYHFCKFSMLKNDSVWSTEGKESEDCHRTEPGGMSDREILEAKRDEANTNQSCSKSFGENTYNEGLQYVALSGENSSEVEIWDLKSAQKIVQLPSSNPSDSSSACKKGMCMALQLFLSSESQGLLNVLAGYEDGSMLWWDIRNPRVPVTSVKFHSEPVLSICTDGSCKGGISGAADDKIVMYSLDHSSGTCIVKKEISLERPGISGISIRPDGKIAATAGWDHRVRIYNYRKGNPLAILKYHHGTCNAVTYSSDCKLMASASEDTTVGLWELYPPLI 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00314 385 PRINTS G protein beta WD-40 repeat signature 366 380 IPR020472 -
Phco7g00314 385 PRINTS G protein beta WD-40 repeat signature 78 92 IPR020472 -
Phco7g00314 385 PRINTS G protein beta WD-40 repeat signature 32 46 IPR020472 -
Phco7g00314 385 ProSiteProfiles Trp-Asp (WD) repeats profile. 347 380 IPR001680 GO:0005515
Phco7g00314 385 SMART WD40_4 298 337 IPR001680 GO:0005515
Phco7g00314 385 SMART WD40_4 48 91 IPR001680 GO:0005515
Phco7g00314 385 SMART WD40_4 340 379 IPR001680 GO:0005515
Phco7g00314 385 SMART WD40_4 6 45 IPR001680 GO:0005515
Phco7g00314 385 SMART WD40_4 252 291 IPR001680 GO:0005515
Phco7g00314 385 ProSitePatterns Trp-Asp (WD) repeats signature. 366 380 IPR019775 -
Phco7g00314 385 SUPERFAMILY WD40 repeat-like 4 379 IPR036322 GO:0005515
Phco7g00314 385 ProSiteProfiles Trp-Asp (WD) repeats profile. 13 54 IPR001680 GO:0005515
Phco7g00314 385 Pfam WD domain, G-beta repeat 312 337 IPR001680 GO:0005515
Phco7g00314 385 Pfam WD domain, G-beta repeat 341 378 IPR001680 GO:0005515
Phco7g00314 385 Pfam WD domain, G-beta repeat 9 45 IPR001680 GO:0005515
Phco7g00314 385 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 13 45 - -
Phco7g00314 385 Gene3D - 4 138 IPR015943 GO:0005515
Phco7g00314 385 Gene3D - 148 304 IPR015943 GO:0005515
Phco7g00314 385 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 347 385 - -
Phco7g00314 385 PANTHER TRANSDUCIN BETA-LIKE 3 4 380 - -
Phco7g00314 385 Gene3D - 305 382 IPR015943 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00314 7 2201514 2208441 Phco7g00314 7 2201514 2208441 ECH