Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00295 ATGGGAGAAAAATCGAAGTCCAAAGGAGGGTGTTGCGGTTGGTTCATCGCGTTTGTCATTCTGGCTATCGTCGTCGGTGCTGTTGTTTATACCGTTAAGAAGAAATTCGGTCACTCCGGTTCCGATAAAGCCGCTCCGGTTCCCGGTCCCCCTGGCGCCGTTGATCAGAAATACGCCACTGCACTAAAAACCTCATTGCAATTCTTCGATATTCAAAAATCTGGGAAGTTAGTCAACAACAAAATACCTTGGAGAGGGGATTCGGGTCTTAAGGATGGGAGCCAAGCGAAGCTGGATCTCTCAAAGGGAATGTATGATGCTGGGGATCACATAAAATTTGGTTTTCCGATGGCTTTTACGGCGACGGTGTTGTCGTGGGCCATTCTGGAATATGGAGATCAAATGGATCACGTTGGCCAGTTAGACTCGGCTCAAGATTCGCTCAAGTGGATCACTGATTATCTCATCAAGGCTCACCCTTCTGCCAATGTTCTTTACGTTCAGGTGGGTGATCCTGTTGCAGATCACAAGTGTTGGGAAAGGCCAGAAGACATGACTGAGGCTCGACCACTCATACAAGTGAATGAATCTTATCCTGGATCAGACGTTGCAGCTGAAACTGCAGCTGCCATGGCCTCAGCATCTTTGGTATTTAAAAAGACTGATTCTACGTATTCAAGCACACTCCTCAAGCATGCAAAACAGTTGTTTACTTTTGCTGACAAAAAGAGGGGATATTATAGTGAGAGTATACCTGAAGTCCAGACATATTATAACTCAACTGGATATGGCGATGAGCTTTTATGGGCTGCTAGCTGGCTCTATCATGCTACGGGTGATGATTCTTACCTTCAGTTTGTGACTGGCCCAGATGGAGAAGACTATGCTGATTGGGGAAGCCCAACCTGGTTCAGTTGGGATAACAAGCTTGCTGGAACTCAGGTTTTGTTATCTAGATTAGGCTTTTTTAAGGCAAAGGACATTTCAAATTCGTATGGCTCTGGGCTCCAAAGTTACAGGAAAACAGCTGAGGCTGTAATGTGTGGCCTTCTTCCGGATTCTCCAACAGCCACAAAAAGCAGAACAGATGATGGTCTTATATGGGTGAGCCAATGGAACTCTTTGCAACAACCAGTTGCATCTGCATTCTTAGCTGTTGTGTACAGTGACTATATGCTAACATCGCAGACACCAAAACTAAAATGTGATTCAGATTCCTATACCCCATCAGATCTTCGAGACTTCGCCAAATCTCAGGCTGATTACGTATTGGGCAAGAATCCTATGGATATGAGTTTTCTGGTGGGCTACGGAGATAAATTCCCGCAATTTGTGCATCATAGGGGTGCTTCAATTCCTGCTGATGCAAAAACTGGCTGCAAGGATGGTTTCAAGTGGCTTGACTCATCTGATCCAAATCCCAATGTAGCTACCGGAGCACTTGTTGGTGGACCCTTCTTGAATGAGACTTTCATTGATTCCAGGAACAATCTCATGCAAACAGAACCAAGCACGTACAACAGTGCTGTCATAGTCGGTCTCCTATCAAGTTTAGTCACCACGTCTTCTGTTGTTCAATCCTTTACCTAA 1590 0.4522 MGEKSKSKGGCCGWFIAFVILAIVVGAVVYTVKKKFGHSGSDKAAPVPGPPGAVDQKYATALKTSLQFFDIQKSGKLVNNKIPWRGDSGLKDGSQAKLDLSKGMYDAGDHIKFGFPMAFTATVLSWAILEYGDQMDHVGQLDSAQDSLKWITDYLIKAHPSANVLYVQVGDPVADHKCWERPEDMTEARPLIQVNESYPGSDVAAETAAAMASASLVFKKTDSTYSSTLLKHAKQLFTFADKKRGYYSESIPEVQTYYNSTGYGDELLWAASWLYHATGDDSYLQFVTGPDGEDYADWGSPTWFSWDNKLAGTQVLLSRLGFFKAKDISNSYGSGLQSYRKTAEAVMCGLLPDSPTATKSRTDDGLIWVSQWNSLQQPVASAFLAVVYSDYMLTSQTPKLKCDSDSYTPSDLRDFAKSQADYVLGKNPMDMSFLVGYGDKFPQFVHHRGASIPADAKTGCKDGFKWLDSSDPNPNVATGALVGGPFLNETFIDSRNNLMQTEPSTYNSAVIVGLLSSLVTTSSVVQSFT 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00295 529 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 422 448 IPR018221 -
Phco7g00295 529 SUPERFAMILY Six-hairpin glycosidases 56 520 IPR008928 GO:0005975
Phco7g00295 529 Pfam Glycosyl hydrolase family 9 58 515 IPR001701 GO:0004553|GO:0005975
Phco7g00295 529 PANTHER ENDO-1,4-BETA-GLUCANASE 27 520 - -
Phco7g00295 529 FunFam Endoglucanase 54 523 - -
Phco7g00295 529 Gene3D - 55 522 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00295 Phco-Chr7 2043298 2055128 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00295 7 2043298 2055128 Phco7g00295 7 2043298 2055128 ECH