Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00269 ATGCAGCAAGGAGATTACACCCCCGCTCCCTATTATCAATTTTCTCATCACCAAAACCCCAACCCCAACCCCAACCCCAACCCTTCCGATCCCCACCCCAACAACCTCTACGCCTCTGCACCTCCCTTCACCCCCAATTACGCTCCTTCCGATTACACCAACTATCATCCTTCCTACCCTCAAAATCCCGATCCTATTCCACCCACTGCTCCTCCTTCCTTCGCTCCCTCTTCCTCCACCTCTAATTTCAATTCGCCCTTCGAATCAAACCCTTCTTACCAACAACCACAACAACAACCCTATTTCCCACCCTATGATCAGCATCAAACGCCTTCCATTTACGCCCCTCCTAACCCCAATTCCGCTCCCTCCCAATACAATTCTGCTTCCTACAGCTACACCGGAGTCTCCTCCGTTCCCCCAATTCCGACCTACGAACCACCCGCCTACGAGCCTCCCGTGAGGCCCGATCAGGGCGGCGGCTATTTAGACGACAGGTACGGAGGAAGCTTCAATAGGACTCGTTCTTCTGATTTGGGATCCGATTATTATGGAAAGAGCGGTGGTAATTCGAGGTACGAAGCTAGCGGTGGTAATTCGAGATACGAAGCTAGCGGCGGTAATTCGAGGTACGAAGCTAGCGGCGCCAGTGATGATGGTTACGGAGATGGGGTGTATGCTTACCAGGGAGGGAAAGTGGAACCCTATGGGGCGCGTGGCACGGCGCCGAAGTCATCGAATTGGGCGGCATTTGATGATTATGGGAGGTCCATCAGTTTTCCCTCGCAGAAGGAATCTTCTGCTGGGGTTAAGATTGTGAAAGCGGTGCCCAAGGTTGACACCCATGAAGACGTGAAAGGTGGTGGCGTGCAAAAGTTTCGGGTCAAGCTGTTGGCAGAAAGTGGGGGTCAGAGCACCATGGATGTTCTGTGTCAGATTGGCTTGGATGGAATTCGTATGCTGGATCCAAATACCAGCCGGACATTGAGGATTTATCCTCTAGAGAACATAACAAGATGTGATAGAGTTGATTCATCCACCTTTGCATTTTGGTCGAAGAGCCCTGTGGATATCGAGCCAATACGAATCAGATTGCAATCTAATAGTTACACCACTAACACACTCCTGGATACAGTGACTGCTGCAACAATACAGTTCAAGGAAATGGGTGGAAGCAGAAGGCCTGCTGAACCATTGAAAACAAATGAACAGACTCAAGACAGAAAGAAAGGTTTTGGTGATTGGATGAATCTGATTAAACCTGCCAATGAAGAGAAGGATCATTGGGTACCAGATGAAGCTGTGACAAAATGTACAGCATGTGGCACTGATTTTGGGGCTTTTATTCGCAAGCACCACTGTAGGAACTGTGGTGATATTTTCTGTGACAAATGTACACATGGTAGAATTGCTCTAACTGCCGAAGAGAATGCGCAGCCTGTGCGAGTTTGTGACCGGTGCATGGCAGAAGTGTCTCAGCGGCTGACTAGTGCCAAGGAGTCATTGAGTAAACCTGCGTTGCAGAGTCATGAGGATCTTGCCAGGAAACTTCAGGAGGAGCTGGAGAGAAATCGAAAGACGTCAGGTTCCAAGTCTGATGGATCTGCAAGGCGGATGAAGGAAGTTGCATGTCCTATTTGCACTGTTCATCTGCAGGTTCAGGTGCCTAGCTCGGGTTCAGAGACCATTGAGTGTGGAGTGTGCCAGCACCCATTTCTTGTGAGTGCTCATTGA 1734 0.4977 MQQGDYTPAPYYQFSHHQNPNPNPNPNPSDPHPNNLYASAPPFTPNYAPSDYTNYHPSYPQNPDPIPPTAPPSFAPSSSTSNFNSPFESNPSYQQPQQQPYFPPYDQHQTPSIYAPPNPNSAPSQYNSASYSYTGVSSVPPIPTYEPPAYEPPVRPDQGGGYLDDRYGGSFNRTRSSDLGSDYYGKSGGNSRYEASGGNSRYEASGGNSRYEASGASDDGYGDGVYAYQGGKVEPYGARGTAPKSSNWAAFDDYGRSISFPSQKESSAGVKIVKAVPKVDTHEDVKGGGVQKFRVKLLAESGGQSTMDVLCQIGLDGIRMLDPNTSRTLRIYPLENITRCDRVDSSTFAFWSKSPVDIEPIRIRLQSNSYTTNTLLDTVTAATIQFKEMGGSRRPAEPLKTNEQTQDRKKGFGDWMNLIKPANEEKDHWVPDEAVTKCTACGTDFGAFIRKHHCRNCGDIFCDKCTHGRIALTAEENAQPVRVCDRCMAEVSQRLTSAKESLSKPALQSHEDLARKLQEELERNRKTSGSKSDGSARRMKEVACPICTVHLQVQVPSSGSETIECGVCQHPFLVSAH 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00269 577 MobiDBLite consensus disorder prediction 192 212 - -
Phco7g00269 577 MobiDBLite consensus disorder prediction 75 139 - -
Phco7g00269 577 SUPERFAMILY PH domain-like 294 355 - -
Phco7g00269 577 Coils Coil 507 527 - -
Phco7g00269 577 CDD PTB 279 350 - -
Phco7g00269 577 MobiDBLite consensus disorder prediction 1 20 - -
Phco7g00269 577 MobiDBLite consensus disorder prediction 170 184 - -
Phco7g00269 577 CDD FYVE_EEA1 429 491 - -
Phco7g00269 577 PANTHER PROTEIN FREE1 1 577 IPR045893 GO:0036258|GO:0043130
Phco7g00269 577 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 432 492 IPR017455 -
Phco7g00269 577 Pfam FYVE zinc finger 428 492 IPR000306 GO:0046872
Phco7g00269 577 SMART fyve_4 424 493 IPR000306 GO:0046872
Phco7g00269 577 MobiDBLite consensus disorder prediction 1 216 - -
Phco7g00269 577 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 419 497 IPR013083 -
Phco7g00269 577 SUPERFAMILY FYVE/PHD zinc finger 427 499 IPR011011 -
Phco7g00269 577 MobiDBLite consensus disorder prediction 60 74 - -
Phco7g00269 577 FunFam Zinc finger, FYVE-type, endofin 419 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00269 Phco-Chr7 1879518 1886471 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00269 7 1879518 1886471 Phco7g00269 7 1879518 1886471 ECH