Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00244 ATGCCTCAAAAACACAACACCGTTGTCTACCTCCATGGGACCCTCGATCTGGTAATCGTCGAGGCTCGCTTTCTTCCCAACATGGACTTGCTCTCCGAGCGCGTTCGAAGGTTCTTCTCCGCCCTCAACACTTGCAGTGCCTCCATCACCGGAAAACGGAAGCTCCACCGCGCCCGCCACCGCCACCGCAAGATCATCACCAGCGATCCCTACGTCACCGTCTGCCTCGCGGGCGCCACCGTCGCGCGCACCCGCGTGATCTCTAATTCGCAGAACCCTACCTGGGACGAGCACTTCAAGATCCCGCTCGCGCACCCGGCCGCGCAGGTCGACTTCTTCGTCAAGGACAACGACATGTTCGGAGCCGACCTCATTGGAGTAGTCACCGTCTCCGCCGAGAGGATCCTCTCCTGCGAACCCATCAGCGACTGGTTCCCGATCATCGGCTCGTTCGGGAAGCCGCCAAAGCCTGACTGCGCGCTGCGCCTCGCGATGAAATTCACGAGGTGCGAGGACAGTCGCATGTTCCGGTCCATCGACGAACCGGATCCGGACCGGTTCGTGGTTCGGGACTCGTATTTCCCGGTCCGGCACGGAGGGGCTGTGACGCTGTATCAGGACGCGCACGTGCCTGAGGGGATGTTGCCGGAGGTTGAGTTAGACGAGGGTGTGGTGTTTGAGCATGGGAAGTGCTGGGAAGATATATGCCACGCCATTTTGGAAGCGCACCATTTGGTTTATATTGTGGGTTGGTCCATCTACCATAAGGTTAGGCTCGTGAGAGAGCCTACCAAACCTTTACCTAGCGGTGGTAGTTTGAATTTGGGGGAGTTGCTCAAGTACAAGTCCCAAGAAGGTTTGCGAGTTTTACTATTGGTTTGGGATGATAAGACTTCGCACAGCAAGTTTTTCATTAACACGACTGGAGTAATGCAAACGCATGATGAAGAAACTCGAAAGTTTTTCAAGCATTCTTCAGTTAGATGTTTGCTGTCACCAAGATATGCCAGCAGTAAGCTTAGCATTTTCAGGCAGCAGGTTGTTGGAACGCTCTTTACACATCATCAGAAATGTGTGATTGTGGATACTCAAGCACACGGGAATAATAGGAAGATAACTGCATTTATAGGTGGTCTAGATCTTTGTGATGGCCGGTATGATACACCTGAGCACAGAATTTTTCGCGATATTGACACTGTTTATCAGGAGGATTATCATAATCCCACATTTTGTACGGGAACCAAGGGTCCAAGGCAACCATGGCATGATTTACATTGCAAAATTGAAGGCCCTGCTGCATATGATATACTCACTAATTTTGAACAGCGCTGGAAAAAGGCTACCAGATGGTCTGAGTTGGGTCGAAAACTCAAAAGAGTATCTCACTGGCACGATGATTCTTTGATCAAGTTAGAACGCATCTCTTGGATTCTTAGTCCTTCTGAATCAATTCAAACCGATGATCCTGAACTATGGGTTTCAAAGGAAGACGATCCTAAAAATTGGCATGTTCAGGTTTTTCGATCCATAGATTCTGGCTCTTTGAAAGGATTTCCTAAGGATGTATTTGAAGCTGAGTCCCAGAACCTTGTTTGTGCAAAAAATTTGGTTGTAGACAAGAGTATTCAAACAGCATATATACATGCTATCAGATCTGCTCAACATTTTATTTATATCGAGAATCAATATTTTGTTGGATCATCCTTTGCTTGGCCAGCTTACAAAGATGCAGGCGCTGATAACCTAATTCCGATGGAGTTGGCACTGAAGATAGTCAGTAAGATACGATCCAAGGAGAGATTTACAGTTTATATTGTCATCCCAATGTGGCCCGAAGGTACCCCTTCATCTGCTACTGTGCAAGAGATACTCTTTTGGCAGGGACAAACTATGCAAATGATGTATGATGTCATAGCTCGGGAAATAAAAGCTATGGAACTTGACAGTCATCCACTAGATTATCTCAACTTTTATTGTCTTGGAAACCGAGAGCCGTTCAATACTGATTTTTCAAGCTCAAGTAATTCGCCTCCAGATAATGGCGAAACGATTTCAGCCTCACAAAAGTTCCGAAGGTTCATGATTTATGTACATGCCAAGGGAATGATTGTGGATGATGAATATGTAATTCTTGGGTCTGCCAATATCAATCAACGATCTATGGCTGGATCAAGAGATACTGAGATAGCCATGGGGGCATATCAACCCCATCATACATGGAGTGCGAAAAAGGGGCATCCACATGGTCAGGTATATGGGTATAGGATGTCTTTATGGGCAGAACACATGGGGAGCATAGAAGGTTGCTTTAAGGATCCTGGAAGTCCGGACTGCGTGAAAAGTGTGAACAATATTGCTGAAGAAAACTGGAGGAAGTACATAGCTGATGATTATACTCCATTGAAAGGGCACCTGATAAAATATCCTGTGAATATAAATATCAATGGGAAGGTAAAGTCCATACCCGGATTTGAGTCTTTCCCAGATGTTGGGGGCAAGGTGCTTGGCTCCAGGTCTAACCTTCCTGATGCTCTAACCACATAG 2544 0.4701 MPQKHNTVVYLHGTLDLVIVEARFLPNMDLLSERVRRFFSALNTCSASITGKRKLHRARHRHRKIITSDPYVTVCLAGATVARTRVISNSQNPTWDEHFKIPLAHPAAQVDFFVKDNDMFGADLIGVVTVSAERILSCEPISDWFPIIGSFGKPPKPDCALRLAMKFTRCEDSRMFRSIDEPDPDRFVVRDSYFPVRHGGAVTLYQDAHVPEGMLPEVELDEGVVFEHGKCWEDICHAILEAHHLVYIVGWSIYHKVRLVREPTKPLPSGGSLNLGELLKYKSQEGLRVLLLVWDDKTSHSKFFINTTGVMQTHDEETRKFFKHSSVRCLLSPRYASSKLSIFRQQVVGTLFTHHQKCVIVDTQAHGNNRKITAFIGGLDLCDGRYDTPEHRIFRDIDTVYQEDYHNPTFCTGTKGPRQPWHDLHCKIEGPAAYDILTNFEQRWKKATRWSELGRKLKRVSHWHDDSLIKLERISWILSPSESIQTDDPELWVSKEDDPKNWHVQVFRSIDSGSLKGFPKDVFEAESQNLVCAKNLVVDKSIQTAYIHAIRSAQHFIYIENQYFVGSSFAWPAYKDAGADNLIPMELALKIVSKIRSKERFTVYIVIPMWPEGTPSSATVQEILFWQGQTMQMMYDVIAREIKAMELDSHPLDYLNFYCLGNREPFNTDFSSSSNSPPDNGETISASQKFRRFMIYVHAKGMIVDDEYVILGSANINQRSMAGSRDTEIAMGAYQPHHTWSAKKGHPHGQVYGYRMSLWAEHMGSIEGCFKDPGSPDCVKSVNNIAEENWRKYIADDYTPLKGHLIKYPVNININGKVKSIPGFESFPDVGGKVLGSRSNLPDALTT 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00244 847 CDD C2_plant_PLD 8 168 - -
Phco7g00244 847 SMART pld_4 693 720 IPR001736 GO:0003824
Phco7g00244 847 SMART pld_4 350 385 IPR001736 GO:0003824
Phco7g00244 847 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 350 385 IPR001736 GO:0003824
Phco7g00244 847 FunFam Phospholipase D 509 739 - -
Phco7g00244 847 Pfam C2 domain 13 147 IPR000008 -
Phco7g00244 847 Gene3D Endonuclease Chain A 510 742 - -
Phco7g00244 847 Pfam Phospholipase D C terminal 768 837 IPR024632 -
Phco7g00244 847 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 693 720 IPR001736 GO:0003824
Phco7g00244 847 ProSiteProfiles C2 domain profile. 1 145 IPR000008 -
Phco7g00244 847 Gene3D C2 domain 11 178 IPR035892 -
Phco7g00244 847 Pfam Phospholipase D Active site motif 351 385 IPR001736 GO:0003824
Phco7g00244 847 Pfam Phospholipase D Active site motif 694 720 IPR001736 GO:0003824
Phco7g00244 847 PIRSF PLD_plant 1 847 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Phco7g00244 847 Gene3D Endonuclease Chain A 225 468 - -
Phco7g00244 847 SMART C2_3c 14 144 IPR000008 -
Phco7g00244 847 SUPERFAMILY Phospholipase D/nuclease 542 771 - -
Phco7g00244 847 PANTHER PHOSPHOLIPASE D 5 837 IPR015679 -
Phco7g00244 847 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 10 164 IPR035892 -
Phco7g00244 847 FunFam Phospholipase D delta 222 466 - -
Phco7g00244 847 SUPERFAMILY Phospholipase D/nuclease 178 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00244 Phco-Chr7 1668629 1675701 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00244 7 1668629 1675701 Phco7g00244 7 1668629 1675701 ECH