Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00176 ATGGAGGAGGGCAAAGCAGCAGCTCAGAAATCTCTTGAGGATTTTGATCCTAAAAAGGCCCCAAAAAGGAACAAGTTTGCTTTCGCTTGTGCCATATTGGCTTCCATGACTTCCATATTACTTGGCTATGACGTTGGGGTGATGAGTGGAGCGGTGATATATATAAAGAGGGACCTGAAACTGACGGACGTGCAAATCGAGATCGTGGTTGGAATCATCAACCTATACTCTCTGGTAGGTTCGTGCCTCGCCGGGAGAACCTCGGACTGGATCGGTCGGCGTTACACGATCGTCCTGGCCGGAGGCATCTTCTTCACGGGAGCCATCCTCATGGGATTCTCTCCAAACTATCCCTTTCTCATGTTCGCGCGATTTGTGGCGGGCGTGGGCATCGGTTATGCTCTGATGATTGCCCCCGTCTACACGGCGGAAGTGTCCCCTCCTTCGTGTCGTGGCTTTCTGACCTCCTTCCCCGAGGTATTCGTGAATGGAGGGATATTACTGGGATACATATCAAACTACGGCTTTTCCAAGCTGCCACTTCACATGGGATGGAGGATGATGCTGGGAGTGGGGGCGGTGCCTTCGGTTATCCTGGCGGTGGGAGTGTTGGCCATGCCGGAGTCCCCACGGTGGTTGGTCATGAGAGGTAGGCTCGCCGAAGCCGCAATAGTTCTCAACAAAATCTCCGATTCTCCCCAAGAGGCTCAGCTCAGGCTAGCAGATATCAAAGCCGCCGCTGGAATCCCGGAGAACTGTAACGACGACGTCGTTCAAGTGGCGAACCAGAACAGCGGCCGCGAGGGTGTATGGAAAGAGCTACTCCTTTACCCTACACCCGCAGTGCGTCACATCCTCATCGCCGCTCTGGGCCTCCACTTCTTCCAACAGGCTTCCGGCATAGACGCCGTCGTGCTGTACAGCCCCGAGATTTTCAAAAAGGCTGGCCTGGAATCCGACGGCGAGCAGCTTCTCGCAACCGTGGCCGTTGGATTCGCCAAGACGGTTTTCATCTTAGTGGCTACGTTTTTGTTGGATCGGGTCGGGCGTCGCCCCTTGTTATTGACCAGCGTTGGCGGCATGGTCTTCTCGCTTCTCACGCTCGCCGTTAGCCTCACCATCATTGATCGCTCACGCGCCGTGCTGAAGTGGGCCATTGGGCTGAGCATAGCGACGGTTTTATCCTACGTGTCGACGTTTTCCGTTGGGGCGGGTCCCATCACCTGGGTATACAGCTCGGAGATCTTCCCGTTGAGGCTACGCGCCCAGGGTGCGGCTATGGGAGTTGTGGTGAATAGGGTGACGAGTGGAGTGATCTCAATGACGTTCTTGTCCCTGTCTAATAAGATAACTATTGGTGGGGCCTTCTTCATCTTTGGGGGAATAGCGATGTGTGGATGGATCTTCTTCTTTACCATGCTCCCCGAAACACAGGGCAAGACCCTTGAGGAAACGGAAGAGTGTTTTGGTAAATTCGGTGCATGGTCCCACAGCAAGGGTAATAAGGACAGTGACAAAAATGCCGAGATAGAATTAGTCAATTGA 1545 0.5392 MEEGKAAAQKSLEDFDPKKAPKRNKFAFACAILASMTSILLGYDVGVMSGAVIYIKRDLKLTDVQIEIVVGIINLYSLVGSCLAGRTSDWIGRRYTIVLAGGIFFTGAILMGFSPNYPFLMFARFVAGVGIGYALMIAPVYTAEVSPPSCRGFLTSFPEVFVNGGILLGYISNYGFSKLPLHMGWRMMLGVGAVPSVILAVGVLAMPESPRWLVMRGRLAEAAIVLNKISDSPQEAQLRLADIKAAAGIPENCNDDVVQVANQNSGREGVWKELLLYPTPAVRHILIAALGLHFFQQASGIDAVVLYSPEIFKKAGLESDGEQLLATVAVGFAKTVFILVATFLLDRVGRRPLLLTSVGGMVFSLLTLAVSLTIIDRSRAVLKWAIGLSIATVLSYVSTFSVGAGPITWVYSSEIFPLRLRAQGAAMGVVVNRVTSGVISMTFLSLSNKITIGGAFFIFGGIAMCGWIFFFTMLPETQGKTLEETEECFGKFGAWSHSKGNKDSDKNAEIELVN 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00176 514 Gene3D MFS general substrate transporter like domains 21 491 IPR036259 -
Phco7g00176 514 NCBIfam sugar porter family MFS transporter 16 485 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco7g00176 514 SUPERFAMILY MFS general substrate transporter 16 487 IPR036259 -
Phco7g00176 514 ProSitePatterns Sugar transport proteins signature 2. 126 151 IPR005829 GO:0016020|GO:0022857|GO:0055085
Phco7g00176 514 PRINTS Sugar transporter signature 38 48 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco7g00176 514 PRINTS Sugar transporter signature 413 425 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco7g00176 514 PRINTS Sugar transporter signature 296 306 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco7g00176 514 PRINTS Sugar transporter signature 390 411 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco7g00176 514 PRINTS Sugar transporter signature 121 140 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco7g00176 514 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 23 495 IPR045262 GO:0015144
Phco7g00176 514 Pfam Sugar (and other) transporter 30 489 IPR005828 GO:0016020|GO:0022857|GO:0055085
Phco7g00176 514 ProSiteProfiles Major facilitator superfamily (MFS) profile. 30 478 IPR020846 GO:0022857
Phco7g00176 514 CDD MFS_PLT 33 484 IPR044776 GO:0005351
Phco7g00176 514 FunFam probable polyol transporter 4 20 492 - -
Phco7g00176 514 ProSitePatterns Sugar transport proteins signature 1. 84 101 IPR005829 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00176 Phco-Chr7 1151845 1153726 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00176 7 1151845 1153726 Phco7g00176 7 1151845 1153726 ECH