Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00163 ATGGCTAATACGGCACCGTCTCTTGCAATTCTCCTCTTCCTTCCTCTATTCTTCTCCCTCGCTAACTCCCAATCTTTCATAGGAGTGAACTACGGCCAGGTCGCCGACAACCTTCCGCCGCCGGACTCCACAGCCGCCCTTCTCAAATCCACCTCCATCGGAAAAGTCCGTCTCTACGGCGCTGATCCCGCCATCATCAAGGCCCTTGCCAATTCCGGCATCGGAATCGTCATCGGCGCCGCCAACGGCGACATTCCCAGTCTGGCCTCCGATCCCAACGCGGCCACTCAGTGGGTTAACGCGAACGTGTTACCCTACTACCCCGCCAGCAACATCACTCTCATCACCGTCGGCAACGAGATTTTGACCTTGGCCGACCAGAGTCTTGTCTCGCAGCTCGTGCCGGCGATGCGAAATCTCCAGAATGCCCTCAACGCGGCTTCTGTGAAGATCAAGGTCTCCACGGTGCACTCCATGGCCGTGTTGACTCAGTCGGATCCGCCGTCGTCCGGGCTGTTCAACCCGGCGCTCCAGAACACGCTGAAACAGTTGCTGGCGGTTCTGAAGGATAACAAATCGCCGTTCACGATCAACCCGTACCCGTTCTTCGCCTACCAGAGCGACACGAGAGCCGAAACGCTGGCGTTTTGCCTCTTCCAACCCAACTCGGGCCGGGTCGACTCGGGCAATGGAAAGCTCTACACGAACATGTTCGATGCCCAGGTTGATGCTGTACATTCTGCTTTGAGTGCGATGGGCTTCCAGGACATCGAGATTGTGGTTGCTGAGACTGGATGGCCCTCACGTGGTGACAGTAACGAAGTAGGACCCAGTCTTGAAAATGCAAAGGCCTTTAACGGGAACCTGATTAATCATCTTAGATCATTGGTTGGGACACCTTTGATGCCTGGGAAGTCTGTGGACACTTACATTTTTGCACTCTATGATGAGGATCTCAAACCCGGTCCAGGATCTGAACGCGCGTTTGGGCTGTTCAAAACTGATGGTACCATGGCATACGATGCTGGCTTAGCCAAGTCTAGCCAGCAGACTCCATCAACTAGTCCAAAAACTCCGGTTACTCCAGCACCTAACACTTCTGGATGGTGTGTACCCAAAGCTGGAGTTTCTGATGATCAGTTGCAGGCCAATATTGACTACGCCTGTAGCCAAGGCATAGATTGCGGACCAATTCAACCAGGAGGTGCTTGTTTTGAGCCTAACACAGTAGCATCCCATGCTGCATTTGCCATGAATCTCTACTACCAAACATCTGCCAAAAATCAATGGAACTGTGACTTCTCCCAATCAGCAACACTAACATCCCAAAATCCAAGTTACAATGCTTGCATATACTCTGGTGGGGGCAACTGA 1374 0.5298 MANTAPSLAILLFLPLFFSLANSQSFIGVNYGQVADNLPPPDSTAALLKSTSIGKVRLYGADPAIIKALANSGIGIVIGAANGDIPSLASDPNAATQWVNANVLPYYPASNITLITVGNEILTLADQSLVSQLVPAMRNLQNALNAASVKIKVSTVHSMAVLTQSDPPSSGLFNPALQNTLKQLLAVLKDNKSPFTINPYPFFAYQSDTRAETLAFCLFQPNSGRVDSGNGKLYTNMFDAQVDAVHSALSAMGFQDIEIVVAETGWPSRGDSNEVGPSLENAKAFNGNLINHLRSLVGTPLMPGKSVDTYIFALYDEDLKPGPGSERAFGLFKTDGTMAYDAGLAKSSQQTPSTSPKTPVTPAPNTSGWCVPKAGVSDDQLQANIDYACSQGIDCGPIQPGGACFEPNTVASHAAFAMNLYYQTSAKNQWNCDFSQSATLTSQNPSYNACIYSGGGN 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00163 457 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 17 441 IPR044965 GO:0004553|GO:0005975
Phco7g00163 457 SUPERFAMILY (Trans)glycosidases 27 342 IPR017853 -
Phco7g00163 457 MobiDBLite consensus disorder prediction 344 366 - -
Phco7g00163 457 ProSitePatterns Glycosyl hydrolases family 17 signature. 257 270 IPR000490 GO:0004553|GO:0005975
Phco7g00163 457 Gene3D Glycosidases 26 351 - -
Phco7g00163 457 Gene3D - 364 453 - -
Phco7g00163 457 FunFam Glucan endo-1,3-beta-glucosidase 14 25 350 - -
Phco7g00163 457 FunFam glucan endo-1,3-beta-glucosidase 7 364 453 - -
Phco7g00163 457 Pfam X8 domain 369 439 IPR012946 -
Phco7g00163 457 SMART X8_cls 368 452 IPR012946 -
Phco7g00163 457 MobiDBLite consensus disorder prediction 344 365 - -
Phco7g00163 457 Pfam Glycosyl hydrolases family 17 27 341 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00163 Phco-Chr7 1059977 1063518 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00163 7 1059977 1063518 Phco7g00163 7 1059977 1063518 ECH