Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00160 ATGGCTTCTGCAGAAATTGAGTTCCGATGCTTTGTTGGTGGGCTTGCTTGGGCCACTGACAGCGAAGCTCTTGACAAAGCCTTCTCAAAGTATGGCCAGATCATCGAATCGAAGGTCATCAACGATCGCGAAACTGGAAGATCAAGAGGGTTTGGATTTGTGACCTTCGCCACGGAGCAGGCGATGAGAGAAGCTATCGAAGGTATGAACGGCCAGAACCTAGACGGCCGTAACATCACCGTCAACGAGGCTCAGTCTCGTGGGAGAGGCGGTGGCGGTGGTGGTTATGGAGGCAGCGGCGGTGGTGGATATGGCGGTGGTGGCGGTGGAGGAGGATATGGCCGAGGTGGTGGAGGAGGTAGTTACGGTGGAGGCGGCAGACGTGAAGGTGGTTATAACCGTAATGGTGGTGGGGGAGGTTATGGTGGCGGTGGTGGTGGTTACGGAGGTGGTGGTTATGGAGGTGGACGAGACCGTGGATATGGCGATGGTGGGTCCCGCTACTCGAGAGGAGGTGGTGCTTCGGATGGTGGAAGCTGGAGGAATTAG 549 0.5665 MASAEIEFRCFVGGLAWATDSEALDKAFSKYGQIIESKVINDRETGRSRGFGFVTFATEQAMREAIEGMNGQNLDGRNITVNEAQSRGRGGGGGGYGGSGGGGYGGGGGGGGYGRGGGGGSYGGGGRREGGYNRNGGGGGYGGGGGGYGGGGYGGGRDRGYGDGGSRYSRGGGASDGGSWRN 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00160 182 FunFam Glycine-rich RNA-binding protein GRP1A 2 114 - -
Phco7g00160 182 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 9 168 - -
Phco7g00160 182 SUPERFAMILY RNA-binding domain, RBD 8 118 IPR035979 GO:0003676
Phco7g00160 182 SMART rrm1_1 9 82 IPR000504 GO:0003723
Phco7g00160 182 Gene3D - 2 121 IPR012677 -
Phco7g00160 182 MobiDBLite consensus disorder prediction 147 182 - -
Phco7g00160 182 CDD RRM2_NsCP33_like 9 84 - -
Phco7g00160 182 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Phco7g00160 182 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00160 Phco-Chr7 1024683 1025513 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00160 7 1024683 1025513 Phco7g00160 7 1024683 1025513 ECH