Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00159 ATGAGTTCCAACACGAACACGAACACGAGCACAAACACAACCTCGAAGGAGTCGAAAAAGAGGTTACCGGATTTCGTGCAGAGCGTGAAGCTGAAGTATGTGAAACTGGGGTACCACTACCTGATGTCACACCTGGTAACCCTGTGCCTGCTCCCTCTGATGTCCGTAATCCTCATCCAAGCGTCCCAGATGAAGGCGCAGGACATTCAGGAGCTGTGGGCCCACCTACAGTACAACCTCCTTAGCGTCATCGCTATATCCGCCATCCTCGCCTTGGGATCCACCCTCTACATCATGACCCGCCCCACCTCCATCTACCTCATCGACTACTCCTGCTACCGTCCCCCCCACCACCTCCGCGTCCACTTCCAAAAGTTCCTCCACCACTCCACCCTCACCGGCGACTTCCTCCCCTCTTCCCTCGATTTCCAGCGCAAGATTCTCGAACGCTCCGGCCTCGGCGAGGAAACCTATCTCCCCGAGGCCTTGCACTCCATCCCCCCGCGCCCCTCCATGGACGCCGCCAGGGAAGAGGCCGAGCAAGTAATGTTCGGCGCCCTCGACAACCTCTTCGCCAACACCCGCGTCAAGCCCAAGGACATCGGAATCCTCGTCGTCAATTGCAGCCTCTTCAACCCCACGCCCTCCCTTTCTGCCATGATCGTCAACAAGTACAAGCTCCGTGGCAATGTCAAAAGCTTCAACCTTGGCGGCATGGGCTGCAGCGCCGGCGTCATCGCCATCGATCTCGCGAAAGACATGCTTCAGGTCCACCGCAACACTTACGCTGTCGTCGTCAGCACCGAGAACATCACTCAGAATTGGTACTTCGGGAACAACAAGGCCATGTTGATACCCAATTGCCTCTTCCGCGTTGGTGGGGCCGCCATTCTCCTCTCCAACAAAAGCTCCGATAAAAGACGAGCCAAATACAAGCTTTTGCATGTGGTGAGGACTCACAAAGGGGCGGATGACAAGGCCTTTAGGTGCGTGTACCAGGAACAAGACGATATAGGAAAAACCGGCGTGTCTTTGTCGAAGGATCTCATGGCAATTGCGGGTGGAGCTCTTAAGACTAACATAACCACTTTGGGTCCCCTTGTGTTGCCTATAAGTGAGCAACTTCTCTTCTTTCTCACACTTGTTGTGAAAAAGCTTTTCAACGCCAAGATGAAGCCTTACATCCCTGATTTCAAGCTCGCGTTTGACCATTTCTGCATTCACGCTGGTGGGAGGGCTGTTATTGATGAGCTGGAGAAGAATCTGCAGCTTCTGCCGCTGCATGTGGAGTCTTCGAGGATGACGCTGCACAGGTTCGGGAACACCTCATCGAGTTCAATTTGGTACGAGTTGGCTTACACGGAGGCGAAGGGAAGGATGAGAAAGGGGAACAGAGTGTGGCAGATTGCGTTTGGGAGTGGGTTCAAGTGCAACAGTGCGGTGTGGGAAGCCCTCAGACAAGTGAATCCCTCACCCAAGAGTCCCTGGGAAGATTGCATTCATAAGTACCCAGTTCAGATTGTGTAG 1527 0.5409 MSSNTNTNTSTNTTSKESKKRLPDFVQSVKLKYVKLGYHYLMSHLVTLCLLPLMSVILIQASQMKAQDIQELWAHLQYNLLSVIAISAILALGSTLYIMTRPTSIYLIDYSCYRPPHHLRVHFQKFLHHSTLTGDFLPSSLDFQRKILERSGLGEETYLPEALHSIPPRPSMDAAREEAEQVMFGALDNLFANTRVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNVKSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQNWYFGNNKAMLIPNCLFRVGGAAILLSNKSSDKRRAKYKLLHVVRTHKGADDKAFRCVYQEQDDIGKTGVSLSKDLMAIAGGALKTNITTLGPLVLPISEQLLFFLTLVVKKLFNAKMKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPLHVESSRMTLHRFGNTSSSSIWYELAYTEAKGRMRKGNRVWQIAFGSGFKCNSAVWEALRQVNPSPKSPWEDCIHKYPVQIV 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00159 508 PANTHER 3-KETOACYL-COA SYNTHASE 73 506 IPR012392 GO:0006633|GO:0016020|GO:0016747
Phco7g00159 508 FunFam 3-ketoacyl-CoA synthase 115 484 - -
Phco7g00159 508 SUPERFAMILY Thiolase-like 93 308 IPR016039 GO:0016746
Phco7g00159 508 Gene3D - 141 484 IPR016039 GO:0016746
Phco7g00159 508 SUPERFAMILY Thiolase-like 313 485 IPR016039 GO:0016746
Phco7g00159 508 PIRSF Very_long_ch_3-ktacl-CoA_syn 24 508 IPR012392 GO:0006633|GO:0016020|GO:0016747
Phco7g00159 508 CDD CHS_like 87 482 - -
Phco7g00159 508 Pfam FAE1/Type III polyketide synthase-like protein 97 386 IPR013601 GO:0006633|GO:0016020|GO:0016747
Phco7g00159 508 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 402 483 IPR013747 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00159 Phco-Chr7 1016224 1017750 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00159 7 1016224 1017750 Phco7g00159 7 1016224 1017750 ECH