Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00152 ATGCAATCTGGGAAGATAGTGGAAGGGTTGAACGTCTCGGAGGATGGGTTAAAAGACAAGGAAAAGAACCTAACTTCAAACCTCGGCAATGGTGATAAACCACACGTGCAGATGGATTCTGGCACCGCCCTTCAACAATTTCTTGATCACATACCCATTAGTTCGATAGTTGGCATAAAAAATTCACCTGTTTTGGAATTGAAAGCCGGAGACAGTATAAGGGATGCAATTCATATGTTGTACGAAAAGGACGTCTTTTCTGCAGCAATTGTTGACGTATTAGACTCCAATACGAATAGCGTAACGTTCTCAGATCAGTACATTGGTCTCGTTGATTTTACAAGCATGGTTCTGTGGTGCCTTGAGGAATATGGAAAGATCATGAATGATACCACGGAAAACATTTACAAAGATATCAAGTACAACGGCTTTTTCTCCATCCTGGACCAGATTCCTCAGATTGGACAAACCAAGATTAGCGAGTTGGCCAGATCATTCCTCTGGGAACCATTTTTCCCCGTAAACTTGGATGATACGGTTTTGCATGCACTGCTACTTCTGTCTAAGCATCGGGTGCACGTTTTGCCAGTCATACAGCAACGTGAAGATGGACTCATCGGTTTTGTTACACAGAATGCGGTAGTCCAACACCTTCTTCAATCAAGTGAACTAGAGTGGTTTGATAACATTGCAGACAAGAACTTATCAGATTTGCGATTTGAAGGCCAAGAAAATCCTAGTTGTGTATTTGCGGACCAAAGTGTCGCAGATGCTCTAAAGTCGCTCTGGCAAAACCAAACTGCTCCAGTAGCTGTGGTAGATCGAGAAACTAAGAAGCTCCTTGGCAATGTGAGGAAAAGTGATGTTTATATTCTTGTAAGGAATAATGACCTCTTTAGAAGTAGAACCATTTTAACTGTGGGGGAATTCATTCACATAGAGACTGACAAAGCAAAAACTAAGCCTAGCATTGAACATGATCATGGGGCTTTTCTCACAGCAGGAAGTCTTCGGCTGAAAAACAGCTTCATACCCAGAATGGACTTGCCAGTTGCCAGCAAGGAAAATGCAACGCTCAAGCAAGTAATGGAGCATACCACAGAGACTAACAGCAGTTTCAGCTTTCTGGTCAACGATAAGGAGCAAGTTACAGGTTTGCTCACATTGAGAGATATAATTCTGCTGTTTGGCCCCCCATGTGTTAATTCTACCATTAATGGAGGTGGCTTTTTTGAATTTGCCTTGGAGCAAAGTGGATGTCAAGTGAAAAATGGAACTATGATTCGTAATCACTGA 1296 0.4221 MQSGKIVEGLNVSEDGLKDKEKNLTSNLGNGDKPHVQMDSGTALQQFLDHIPISSIVGIKNSPVLELKAGDSIRDAIHMLYEKDVFSAAIVDVLDSNTNSVTFSDQYIGLVDFTSMVLWCLEEYGKIMNDTTENIYKDIKYNGFFSILDQIPQIGQTKISELARSFLWEPFFPVNLDDTVLHALLLLSKHRVHVLPVIQQREDGLIGFVTQNAVVQHLLQSSELEWFDNIADKNLSDLRFEGQENPSCVFADQSVADALKSLWQNQTAPVAVVDRETKKLLGNVRKSDVYILVRNNDLFRSRTILTVGEFIHIETDKAKTKPSIEHDHGAFLTAGSLRLKNSFIPRMDLPVASKENATLKQVMEHTTETNSSFSFLVNDKEQVTGLLTLRDIILLFGPPCVNSTINGGGFFEFALEQSGCQVKNGTMIRNH 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00152 431 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 45 396 - -
Phco7g00152 431 Pfam CBS domain 165 218 IPR000644 -
Phco7g00152 431 Pfam CBS domain 354 394 IPR000644 -
Phco7g00152 431 Gene3D - 35 225 IPR046342 -
Phco7g00152 431 SMART cbs_1 245 294 IPR000644 -
Phco7g00152 431 SMART cbs_1 349 397 IPR000644 -
Phco7g00152 431 SMART cbs_1 170 219 IPR000644 -
Phco7g00152 431 Gene3D - 228 397 IPR046342 -
Phco7g00152 431 ProSiteProfiles CBS domain profile. 167 224 IPR000644 -
Phco7g00152 431 SUPERFAMILY CBS-domain pair 245 393 IPR046342 -
Phco7g00152 431 SUPERFAMILY CBS-domain pair 42 219 IPR046342 -
Phco7g00152 431 CDD CBS_pair_SF 169 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00152 Phco-Chr7 964156 966223 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00152 7 964156 966223 Phco7g00152 7 964156 966223 ECH