Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00117 ATGGAAGCTATCAGAAAGCAAGCCTCCAAGCTTCGAGAACAGGTCGCTCGTCAACAGCAGGCTGTACTTAAACAGTTTGGGGCTGGTGGATATGGAGGTTCAGATAATATGGTTACTGATGAGGTGGAACTTCAACAACATCAGAAACTTGAGAAGCTTTACATATCAACACGGGCTGGAAAGCATTATCAAAGGGATATTGTTCGTGGTGTGGAAGGTTATATTGTAACTGGATCCAAGCAAGTTGAAATAGGAACAAAGTTATCAGAAGATAGCAGGAAATATGGTGCAGATAATACATGTACCAGTGGTAGTACGTTATCTAGAGCAGCACTAAACTATGCACGTGCCCGTGCGCAAATGGAGAAGGAGCGTGGGAGCTTACTAAAAGCACTTGGAACACAGGTTGCAGAGCCCTTAAGAGCAATGGTGATGGGAGCACCATTGGAGGATGCCCGACATCTTGCTCAACGATATGACAGAATGCGGCAGGAAGCAGAGGCCCAGGCTATTGAAGTTTCCAAACGCCAGGCAAAAGTAAGAGAAACACCAGGCAATACTGAGAATGCAATGAAGCTGGAAGCAGCCGAAGCAAAGCTGCAAGACCTGAAGACAAACATGGCCATATTGGGAAAAGAAGCAGCTGCTGCAATGGCTGCTGTTGAAGCACAGCAGCAGAGGTTAACCCTCCAGCGTATTATAGCTATGGTTGAAGCAGAGCGAGCCTATCATCAAAGAGTACTACAAATACTTGATCAGCTTGAGGGTGAGATGATATCAGAACGACAGCGAATTGAAGCCCCTCCTACACCAAGCGTGGATAACAGCACGCCACCACCTCCATCATATGAAGAAGTAAATGGTGTATATGCTTCTCAAGCACATAATGACTCAACAGATAGTATGGGTTACTTCTTAGGAGAGGTTTTATTTCCCTACCATGCGGAGTCAGAAGTTGAATTGAATCTATCAGTTGGGGATTATATTGTTGTTAGAAAGGTGACGAACAATGGATGGGCCGAGGGCGAATGCAAAGGGAAAGCAGGTTGGTTTCCATTTGGATACATTGAAAGAAGGGAGCGAGTCCTTGCAAGCAAGGTGGCCGAAGTGTTTTGA 1116 0.4561 MEAIRKQASKLREQVARQQQAVLKQFGAGGYGGSDNMVTDEVELQQHQKLEKLYISTRAGKHYQRDIVRGVEGYIVTGSKQVEIGTKLSEDSRKYGADNTCTSGSTLSRAALNYARARAQMEKERGSLLKALGTQVAEPLRAMVMGAPLEDARHLAQRYDRMRQEAEAQAIEVSKRQAKVRETPGNTENAMKLEAAEAKLQDLKTNMAILGKEAAAAMAAVEAQQQRLTLQRIIAMVEAERAYHQRVLQILDQLEGEMISERQRIEAPPTPSVDNSTPPPPSYEEVNGVYASQAHNDSTDSMGYFLGEVLFPYHAESEVELNLSVGDYIVVRKVTNNGWAEGECKGKAGWFPFGYIERRERVLASKVAEVF 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00117 371 SMART SH3_2 305 360 IPR001452 GO:0005515
Phco7g00117 371 Coils Coil 1 21 - -
Phco7g00117 371 SUPERFAMILY SH3-domain 263 359 IPR036028 GO:0005515
Phco7g00117 371 Gene3D SH3 Domains 291 369 - -
Phco7g00117 371 Coils Coil 186 213 - -
Phco7g00117 371 PANTHER SH3 DOMAIN-CONTAINING 16 359 - -
Phco7g00117 371 MobiDBLite consensus disorder prediction 262 286 - -
Phco7g00117 371 Gene3D Arfaptin homology (AH) domain/BAR domain 45 267 IPR027267 -
Phco7g00117 371 ProSiteProfiles Src homology 3 (SH3) domain profile. 302 361 IPR001452 GO:0005515
Phco7g00117 371 Pfam Variant SH3 domain 309 357 IPR001452 GO:0005515
Phco7g00117 371 Coils Coil 149 176 - -
Phco7g00117 371 SUPERFAMILY BAR/IMD domain-like 47 258 IPR027267 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00117 Phco-Chr7 778108 783691 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00117 7 778108 783691 Phco7g00117 7 778108 783691 ECH