Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00109 ATGGCATTTTCCACTTCCAACCTTTTTCCACCTCTTCTGCTCCTTCTTCTCTCTCTCTCCGTTAATTCTGGGACCGCTCACGATTACCAGGAGGCATTGTCCAAGGCAATCCTCTTCTTCGAGGGCCAACGATCCGGATTCTTGCCGCAGGACCAGAGAATGAAGTGGCGCGCCAATTCGGGTATCGGCGACGGCTGGACCTACAACCTCGACCTCACCGGCGGCTACTACGACGCCGGCGACAACGTCAAGTTCGGGTTTCCGATGGCCTTCACCACCACAATGCTCTCCTGGAGTGTCATCGAATTTGGAGACATGATGCCTCCCAACGAGCACAGAAACGCGCTGGTGGCAATCCGTTGGGCTACCGATTATTTGCTCAAAACCGTCTCTCAGCCCAACCGCATTTTCGTTCAGGTGGGTGATCCAATCTCTGACCACAACTGTTGGGAAAGACCCGAGGACATGGACACAAGCAGGACTGTGTATGCTGTTGATGCACCGAACCCAGCTTCAGATGTGGCTGGTGAAACTGCTGCGGCACTGGCTGCTTCATCCATGGCTTTTCGTTCATCAGATCCTGCTTATTCAGAGACTTTGCTACGAAATGCTGTCAAGGCATTTCAACTTGCAGATAACTATAGGGGTGCCTACAGTGACAATGCTAATGTTAGGGATGGTGTCTGCCCATATTATTGCGACTTCGATGGATATCAGGATGAATTGCTATGGGGAGCCGCGTGGCTAAGGAGGGCCACTGAAGAAGACAATTTCCTGAACTACATTCAAAGCAATGGCAAAACGCTAGGTGCTGAAGAAAATATAAATGAGTTCGGTTGGGACAACAAGCATGCTGGCCTTAATGTTCTTGTCTCCAAGGAAGTTCTAGAAGGCAATGTGTTATCTCTTGATTCCTACAAGACTTCGGCAGAGAGCTTTCTCTGCACACTGATACCCGAAACTTCAAGCTCACATATAGAGTATACTCCCGGTGGACTCATATACAGGCCAGGGGGTAGCAACTTGCAGCATGCAACTTCAATTGCTTTCCTTGAATTGGTTTACGCTAATTACCTATCACGCACTTCACAAACCATCAATTGTGGGAACATCTATGTTAATGCACAAACACTTCGCCAGCGTGCTAAGAAGCAAGTTGATTACATTTTGGGCGATAACCCAATGGGTATGTCATACATGGTTGGCTATGGCAACAAATATCCCCAGCGTATTCACCATCGTGGCTCCTCTTTACCCTCCATCAAGGACCATCCTCAAGTCATTGCCTGCAAAGAAGGCTCAATCTACTTCAACTCGTCCAATCCTAATCCTAATGTTCTCGTGGGAGCCATTGTGGGGGGACCAGGAGAAGATGATTTGTATGGGGATGATAGGGCTGATTTTAGGAAGTCCGAACCAACCACATACATTAATGCACCATTTGTTGGGATTTTAGCATACTTTGTTGCTAATCCCAATCCTTGA 1485 0.4822 MAFSTSNLFPPLLLLLLSLSVNSGTAHDYQEALSKAILFFEGQRSGFLPQDQRMKWRANSGIGDGWTYNLDLTGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGDMMPPNEHRNALVAIRWATDYLLKTVSQPNRIFVQVGDPISDHNCWERPEDMDTSRTVYAVDAPNPASDVAGETAAALAASSMAFRSSDPAYSETLLRNAVKAFQLADNYRGAYSDNANVRDGVCPYYCDFDGYQDELLWGAAWLRRATEEDNFLNYIQSNGKTLGAEENINEFGWDNKHAGLNVLVSKEVLEGNVLSLDSYKTSAESFLCTLIPETSSSHIEYTPGGLIYRPGGSNLQHATSIAFLELVYANYLSRTSQTINCGNIYVNAQTLRQRAKKQVDYILGDNPMGMSYMVGYGNKYPQRIHHRGSSLPSIKDHPQVIACKEGSIYFNSSNPNPNVLVGAIVGGPGEDDLYGDDRADFRKSEPTTYINAPFVGILAYFVANPNP 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00109 494 FunFam Endoglucanase 25 493 - -
Phco7g00109 494 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 388 414 IPR018221 -
Phco7g00109 494 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 461 479 IPR033126 -
Phco7g00109 494 PANTHER ENDO-1,4-BETA-GLUCANASE 16 489 - -
Phco7g00109 494 Gene3D - 25 492 IPR012341 GO:0005975
Phco7g00109 494 Pfam Glycosyl hydrolase family 9 29 485 IPR001701 GO:0004553|GO:0005975
Phco7g00109 494 SUPERFAMILY Six-hairpin glycosidases 12 490 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00109 Phco-Chr7 706276 709999 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00109 7 706276 709999 Phco7g00109 7 706276 709999 ECH