Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00099 ATGACGTGGAAATCCCACGTTTTCTTCACGGCAATAGAATCATCGAGACACGCTCAGAGATCGGTCTCTGCCGAGAATTTGAATTTCTCAGATCTATCCGACGTCGTTGCAGATCCATCAACGATCATGGCTGGCTTCAGCGGTGATGAAACGGCACCGTTTTTCGGCTTCCTCGGAGCCGCAGCTGCCCTCGTCTTCTCCTGCATGGGAGCTGCCTATGGAACAGCAAAGAGTGGTGTGGGCGTGGCTTCCATGGGCGTGATGAGACCTGAGCTAGTGATGAAGTCTATTGTTCCAGTTGTTATGGCTGGAGTTTTGGGTATATATGGCCTTATTATTGCTGTTATTATTAGTACCGGTATTAATCCAAAGGCCAAATCTTATTACCTCTTTGATGGTTACGCACATCTCTCCTCTGGTCTTGCCTGTGGCTTGGCTGGGCTGTCTGCTGGCATGGCTATTGGTATTGTTGGTGATGCTGGTGTTAGAGCCAATGCACAGCAACCAAAACTTTTTGTTGGAATGATTCTCATCCTCATTTTTGCTGAAGCTCTTGCGCTCTATGGTCTCATTGTTGGTATTATCCTGTCTTCTCGCGCTGGCCAGTCTAGAGCCGACTAA 621 0.4831 MTWKSHVFFTAIESSRHAQRSVSAENLNFSDLSDVVADPSTIMAGFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00099 206 FunFam V-type proton ATPase proteolipid subunit 52 203 - -
Phco7g00099 206 NCBIfam V-type ATPase subunit C 54 162 IPR011555 GO:0033179|GO:0046961|GO:1902600
Phco7g00099 206 CDD ATP-synt_Vo_c_ATP6C_rpt1 54 121 - -
Phco7g00099 206 SUPERFAMILY F1F0 ATP synthase subunit C 55 118 IPR035921 -
Phco7g00099 206 Pfam ATP synthase subunit C 58 117 IPR002379 GO:0015078|GO:0033177|GO:1902600
Phco7g00099 206 Pfam ATP synthase subunit C 138 196 IPR002379 GO:0015078|GO:0033177|GO:1902600
Phco7g00099 206 Gene3D - 52 203 IPR035921 -
Phco7g00099 206 SUPERFAMILY F1F0 ATP synthase subunit C 128 197 IPR035921 -
Phco7g00099 206 PRINTS Vacuolar ATP synthase 16kDa subunit signature 97 121 IPR000245 GO:0033179|GO:0046961|GO:1902600
Phco7g00099 206 PRINTS Vacuolar ATP synthase 16kDa subunit signature 71 95 IPR000245 GO:0033179|GO:0046961|GO:1902600
Phco7g00099 206 PRINTS Vacuolar ATP synthase 16kDa subunit signature 175 198 IPR000245 GO:0033179|GO:0046961|GO:1902600
Phco7g00099 206 PRINTS Vacuolar ATP synthase 16kDa subunit signature 148 174 IPR000245 GO:0033179|GO:0046961|GO:1902600
Phco7g00099 206 CDD ATP-synt_Vo_c_ATP6C_rpt2 130 197 - -
Phco7g00099 206 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 45 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00099 Phco-Chr7 625687 627191 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00099 7 625687 627191 Phco7g00099 7 625687 627191 ECH