Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00097 ATGGCCGCTTCTAATCTCTCCACCCTCTGCTCTTCTTCACACTCCAAACCCTCTTCTTTCCCTTTCTGCAACACACAAAGCTTCATCACCACCACCAACAACAATAACACTCTTTTTCTCAACAACACCAACTCCCTCCAAACCCTTCTCTCTCATTCCACTCACAACCCCCGTTACCTTCTGCCTCTCCCATGCACCAAAACCACAAACACTTTCGCCTCCTTCGATGATGATAACGAAAAGCCCCGCGAAGAGTGTGGCGTTGTGGGCATCTACGGTGACCCAGAAGCCTCCCGTCTCTGCTCCCTCGCCCTCCACGCCCTCCAGCACCGTGGCCAGGAAGGCGCTGGCATCGTCGCCGTCCACGACAACCTCCTCCACTCCGTCAACGGAGTTGGCCTCGTTTCTGACGTCTTCGACGAGTCTAATCTATCTCAACTACCTGGTTCCTCCGCCATTGGGCACGTCCGCTACTCCACCGCTGGCCACTCCAAGCTGTGCAACGTCCAACCTTTCGTCGCCGGCTACCGTTTCGGCTCTGTCGCCGTCGCGCACAACGGAAACTTCGTGAACTACCGCTCCTTACGCGCCAAACTGGAAGACAACGGGTCCATCTTCAACACGACCTCCGACACCGAGGTCGTTCTCCACCTGATCGCCACCTCCAAGCACAGACCTTTCTTACTCAGAATCGTTGATGCCTGCGAGAATCTGAAGGGCGCGTACTCCCTGGTGTTCCTGACGGAGGACAAGCTGGTGGCCGTGAGGGATCCCTTCGGGTTCCGACCTTTGGTGATGGGAAGGAGAAGCAACGGCGCTGTGGTTTTCGCCTCGGAGACATGCGCGCTGGATTTGATCGAAGCGACGTATGAGAGAGAGGTAAACCCAGGTGAGGTTGTGGTCGTGGACCACACTGGAATCCAATCCCTCTGCCTCGTGTCTCATCCAGAGCCAAAGCAATGCATCTTCGAGCACATATACTTCGCGCTTCCCAACTCTGTTGTCTTCGGAAAGTCTGTGTACGAGTCTAGGAGAAAATTTGGGGAAATATTGGCCACTGAGAGCCCCGTTGAATGCGACGTTGTGATCGCAGTTCCTGATTCTGGGGTAGTGGCTGCGCTTGGTTACGCGGCAAAAGCTGGGGTTCCCTTTCAGCAAGGGTTGATAAGGTCGCACTATGTCGGGAGGACTTTCATCGAGCCCTCGCAGAAAATAAGAGATTTTGGAGTGAAGCTTAAGCTGTCTCCGGTGCGTGGCGTGCTCGAAGGGAAGAGGGTTGTGGTGGTGGATGATTCCATTGTGAGGGGCACCACATCGTCCAAGATTGTGAGGCTGATAAAGGAGGCGGGTGCTAAGGAGGTCCACGTGAGGATTGCGTGTCCGCCCATTGTTGGGTCGTGTTACTATGGTGTGGACACGCCGAGTAAGGAGGAGTTGATTTCCAACAGGATGAGTGTGGAAGAAATGAGGGAGTTCATTGGGTGTGATTCCCTCGCTTTTCTTCCCTTAGATAGGTTGAAGATGTTGTTGGAGGATGATGCTCCCAACTACTGCTATGCTTGTTTCTCCGGTAAATACCCTGTTCAGCCCGAGGAACTTGAAACCACGAGCCTCCATGAGTTTGATTGGGACGGTGCTTTGAATAATGGGAGTTTGAAGGCTATTGAGGAGGAGGGTTGGGTTAGAAACCAGGAGGGAGTGTCTGAGAATAAGATTGTTAGTGTCTGA 1728 0.5359 MAASNLSTLCSSSHSKPSSFPFCNTQSFITTTNNNNTLFLNNTNSLQTLLSHSTHNPRYLLPLPCTKTTNTFASFDDDNEKPREECGVVGIYGDPEASRLCSLALHALQHRGQEGAGIVAVHDNLLHSVNGVGLVSDVFDESNLSQLPGSSAIGHVRYSTAGHSKLCNVQPFVAGYRFGSVAVAHNGNFVNYRSLRAKLEDNGSIFNTTSDTEVVLHLIATSKHRPFLLRIVDACENLKGAYSLVFLTEDKLVAVRDPFGFRPLVMGRRSNGAVVFASETCALDLIEATYEREVNPGEVVVVDHTGIQSLCLVSHPEPKQCIFEHIYFALPNSVVFGKSVYESRRKFGEILATESPVECDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRGVLEGKRVVVVDDSIVRGTTSSKIVRLIKEAGAKEVHVRIACPPIVGSCYYGVDTPSKEELISNRMSVEEMREFIGCDSLAFLPLDRLKMLLEDDAPNYCYACFSGKYPVQPEELETTSLHEFDWDGALNNGSLKAIEEEGWVRNQEGVSENKIVSV 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00097 575 CDD GPATase_N 86 336 IPR035584 -
Phco7g00097 575 Hamap Amidophosphoribosyltransferase [purF]. 85 526 IPR005854 GO:0004044|GO:0009113
Phco7g00097 575 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 84 534 - -
Phco7g00097 575 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 86 527 IPR029055 -
Phco7g00097 575 Pfam Glutamine amidotransferase domain 168 283 IPR017932 -
Phco7g00097 575 CDD PRTases_typeI 348 459 IPR000836 -
Phco7g00097 575 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 86 305 IPR017932 -
Phco7g00097 575 Pfam Phosphoribosyl transferase domain 344 460 IPR000836 -
Phco7g00097 575 Gene3D - 345 509 IPR029057 -
Phco7g00097 575 NCBIfam amidophosphoribosyltransferase 86 527 IPR005854 GO:0004044|GO:0009113
Phco7g00097 575 SUPERFAMILY PRTase-like 321 534 IPR029057 -
Phco7g00097 575 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 86 309 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00097 Phco-Chr7 614021 615748 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00097 7 614021 615748 Phco7g00097 7 614021 615748 ECH