Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00087 ATGGAGAGTAAGTCAGGGAGCAGCAAGCGGAAAAATGGTGCAAAGGGAGAGATTGTGGATGGTTCCAAGATTATGGAGTTGGTTGGAAACGAACAAGTTTTCAGCGACTTTGTGGACAATAAGTTTGACGAGTTGGATAAGGACAGAGATGGAAAACTCTCCATGAAGGAGCTTGAACCTGCTGTTGCTGACATCGGTGCTGGCCTTGGTTTGCCTGCTCAAGGCACTAGTCCGGATTCAGATCACATCTATTTTGAGGTCTTGAATGAGTTCACCCATGGTAAGCAAGAAAAAGTAAGCAAGATGGAGTTCAAAGAGGTTCTCTCAGACATTCTTTTGGGCATGGCTGCTGGACTAAAGCAAGACCCTATTGTTATACTCCGCATGGAAGGGGAAGATCTCCTTGAGTTTGTTAATGGTCCAAGTTATGAAGCAGAAATGGCATCCATTTTCTCTCAGATTGAGTCCCCTAATGGATCACTTCGTGACCATGTAATTGAAGCTTTTGGGAGACTCACTGTTGATCAAGGAATTCCTCCCACATCAGATTCTTGGGTTTTCAACAACATTGTGGATCCAGCACTGTCTCAAGCTGGGCCTGCTTTGGACAAACCTGCTGCTCAGGAGACATTTTTGGAAGAATTTAAGAAAGTGGCATTCAGTGTGGTTGATTTTCTTAAAGAGAAACCTGTCATTGTTGCCCACAGTGAAAACACATTTGATGGACGCGGCGTTAAGAGACTTTTATCCAACAAGTTTGAACTAGACAGGACATTGAACTTGGCCTTAGAGAATCTGCCAAAAGATCGCAATGGAAAAATATCAAAGGACTATCTGCGGCTGGCACTAGATCTGGTGTCTCCATCTGCTGGTTTACCTCCAGTTGGTGCAATTGAAGAGATGGATAAAGTTATCGTTGAAGCCTTTAAGATGGTGAATGTCGAAGACACAAACACGGTTAGAGAAGAAGAATTCAAGAAAATTTTAACTGAAATATTGGGGGGTATCATGTTGCAGTTAGAGGGCAATCCCATATCTGTTTCTTCAAATTCAGTCGTACATGAGCCTTTAGGCTCATCTTCTACACTCTTGCAGCCATCTTCTAGTGAAACAGCATAG 1119 0.4316 MESKSGSSKRKNGAKGEIVDGSKIMELVGNEQVFSDFVDNKFDELDKDRDGKLSMKELEPAVADIGAGLGLPAQGTSPDSDHIYFEVLNEFTHGKQEKVSKMEFKEVLSDILLGMAAGLKQDPIVILRMEGEDLLEFVNGPSYEAEMASIFSQIESPNGSLRDHVIEAFGRLTVDQGIPPTSDSWVFNNIVDPALSQAGPALDKPAAQETFLEEFKKVAFSVVDFLKEKPVIVAHSENTFDGRGVKRLLSNKFELDRTLNLALENLPKDRNGKISKDYLRLALDLVSPSAGLPPVGAIEEMDKVIVEAFKMVNVEDTNTVREEEFKKILTEILGGIMLQLEGNPISVSSNSVVHEPLGSSSTLLQPSSSETA 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00087 372 ProSitePatterns EF-hand calcium-binding domain. 46 58 IPR018247 -
Phco7g00087 372 Gene3D - 11 120 - -
Phco7g00087 372 ProSiteProfiles EF-hand calcium-binding domain profile. 33 68 IPR002048 GO:0005509
Phco7g00087 372 SUPERFAMILY EF-hand 41 342 IPR011992 -
Phco7g00087 372 SMART efh_1 37 65 IPR002048 GO:0005509
Phco7g00087 372 SMART efh_1 304 332 IPR002048 GO:0005509
Phco7g00087 372 SMART efh_1 258 286 IPR002048 GO:0005509
Phco7g00087 372 ProSiteProfiles EF-hand calcium-binding domain profile. 300 335 IPR002048 GO:0005509
Phco7g00087 372 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 129 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00087 Phco-Chr7 547710 551117 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00087 7 547710 551117 Phco7g00087 7 547710 551117 ECH