Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00083 ATGTCTTCCTTTCCGATAGAACGGCCTCAGAAAGGAAGTTTAAAGAGTCCAGAGGCACTAGCTAGCGTGGCAGAAAAGGAGGAATTTAATTTCTCAAAAGCATTAGATAGGCCAAGGGCACTGAATATAGACAGACAGAGATCATGTGATGATAGATCGTTGACTGATCTATCCGTAGGCTTTTCTCCACGTCATTTGGTCACAAAAGCTGATATCACATCTCGCGTGGTAGAACATCTTGACCATTTACATTCCCCTCTGTCAAAGTCTGGCATTAATAGTCCAAGATCAGGGACATGGGATCCACATTCATTAACATCAGAAGCTTGGGAAGCTCTGAGGCGTTCCTTGGTATATTTCCGTGGCCAGCCAGTTGGTACAATTGCTGCTTTGGATTCTTCCGAAGAGAATCTTAATTATGATCAGGTGTTTGTAAGAGACTTTGTCCCAAGTGCTTTGGCTTTTCTGATGCATGGGGAACCGGACATTGTCAAAAATTTTATTCTAAAGACCCTTCGCCTTCAATCGTGGGAGAAAAAGATTGACAGATTCCAGTTAGCAGAAGGGGTGATGCCTGCTAGTTTTAAAGTATTCCATGATCCCGTCAGAAACCACGAAACCCTTATAGCAGATTTTGGTGAAAGTGCAATAGGCAGGGTTGCTCCTGTTGATTCTGGATTTTGGTGGATCATACTACTTCGTGCATACACAAAGTCTACGGGAGACACTTCACTGGCTGAACAACCTGAATGTCAAAAGGGTATGCGCTTGATCCTGAGTCTATGTCTGTCAGAGGGGTTTGACACGTTTCCAACTTTACTATGTGCTGATGGATGCTGCATGATTGATCGCAGAATGGGTGTTTATGGGTATCCAATAGAAATTCAAGCATTGTTCTTCATGGCTCTAAGATGTGCCTTGCAATTGCTTAAGCAAGATGATGAAGGGAAAGAGTTCATGGAGAAAATTTTGCAAAGGCTGCATGCCTTAAGCTATCATATGAAGAGCCACTTTTGGTTGGATTTGAAGCAACTCAATGATGTATACCGCTTCAAAACAGAAGAGTACTCACATACTGCAGTGAACAAGTTCAATGTTATTCCTGAATCTTTGCCAGATTGGGTGTTTGATTTCATGCCGCAATACGGTGGATACTTTGTTGGGAATGTGAGCCCAGCTAGGATGGATTTCCGGTGGTTTTGCCTCGGCAACTGCGTTGCAATTTTGTCGTGCATGGCAACTCCTGAGCAGTCAACTGCAATAATGGATCTCATTGAATCACGCTGGGAGGAATTGATTGGGGAGATGCCTGTCAAAGTCTGTTATCCAGCTCTCGAAAACCATGAATGGATGATCATAACAGGGTGTGACCCAAAAAATACTAGATGGAGTTACCATAACGGGGGATCCTGGCCAGTTCTGGTGTGGCTTCTGACTGCTGCCGCAATAAAGACTGGGAGACCCCAAATTGCAAGACGTGCCCTTCAAATAGCTGAGAGTAAGTTGCTGAAGGACAACTGGCCCGAGTATTACGATGGAACGTTGGGGAGATACGTTGGAAAGCAGGCCCGTAAGTTCCAGACTTGGTCCATTGCTGGCTACTTGGCCGCTAGAATGATGCTTGATGATCCATCCCATCTTGGTCTTGTTGCTCTCGAAGAAGACAGACAACTCAAGCCTTTACTCAAGAGATCAAACTCATGGACTTTCTGA 1713 0.4448 MSSFPIERPQKGSLKSPEALASVAEKEEFNFSKALDRPRALNIDRQRSCDDRSLTDLSVGFSPRHLVTKADITSRVVEHLDHLHSPLSKSGINSPRSGTWDPHSLTSEAWEALRRSLVYFRGQPVGTIAALDSSEENLNYDQVFVRDFVPSALAFLMHGEPDIVKNFILKTLRLQSWEKKIDRFQLAEGVMPASFKVFHDPVRNHETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDTSLAEQPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRMGVYGYPIEIQALFFMALRCALQLLKQDDEGKEFMEKILQRLHALSYHMKSHFWLDLKQLNDVYRFKTEEYSHTAVNKFNVIPESLPDWVFDFMPQYGGYFVGNVSPARMDFRWFCLGNCVAILSCMATPEQSTAIMDLIESRWEELIGEMPVKVCYPALENHEWMIITGCDPKNTRWSYHNGGSWPVLVWLLTAAAIKTGRPQIARRALQIAESKLLKDNWPEYYDGTLGRYVGKQARKFQTWSIAGYLAARMMLDDPSHLGLVALEEDRQLKPLLKRSNSWTF 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00083 570 PANTHER - 27 564 IPR024746 GO:0033926
Phco7g00083 570 Gene3D - 133 537 IPR012341 GO:0005975
Phco7g00083 570 Pfam Alkaline and neutral invertase 109 544 IPR024746 GO:0033926
Phco7g00083 570 SUPERFAMILY Six-hairpin glycosidases 108 537 IPR008928 GO:0005975
Phco7g00083 570 FunFam probable alkaline/neutral invertase B 134 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00083 Phco-Chr7 523922 526174 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00083 7 523922 526174 Phco7g00083 7 523922 526174 ECH