Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00069 ATGCAAGATATCCCCTTCTATGTCCTTATACTTTCCCTCCTTCTAATTCCAACTTCTCTGGTTTCTCCTTTATACGATGGGCCCCTATATGACTTCACTGCCTACACTGAGTGCAAAGAGAAACCAGGGGAGCCACTTTATGGAGGAGGAGTTCTCAAGAGTCAGCAACGGTCTCCTCCTGGTCTTCAAGACAACATTGCCTCGTCTTACGTTGTTAACAACACCTATGTGCCTTCACTCCTTCTCTATAATCTCACCCAGGGCACCATTTACACTTTTTCCGCATGGGTGAGAATTAAAGGTTCAAGTTCAGACATGATAAGGGCTACCCTGGAAACAGAGAAAGAGACGTATGATTGCATCGGGACAGTTTCAGCCAAACTTGGATGCTGGTCATTTCTCAAGGGTGGTTTCGTTCTGACCTCGCCTTCAAATTTATCCATCATCTTCTTCCAGAACGCGGATGGTAAAGACATCAATATAGAAGTTGCTAGTCCATCACTCCAGCCATTTACTAACCAACAATGGAGAATCAATCAACAGTATATGATCAATACTAAAAGAAAGCGTGCGGTCACTGTTCATGTGTCTGATAGCAACGGAAGAAGATTGCAAGGAGCTTCCATCTGTATAGAGCAAATATCAAAAGAGTTCCCTTTTGGATCTGCAATAGCAAAGACCATTCTTGGCAACTTACCCTATCAGAATTGGTTTGCGAAACGATTCAATGCTGCAGTCTTTGAAAATGAGCTGAAATGGTACGCCACAGAACCTGATGAAGGCAGGGTCAATTACACCATTTCAGACCAAATGCTACAATTTGTTAGAACAAACAATATCGTAGCCAGAGGGCACAACATATTTTGGGAAGACCCTAAATACACTCCTCCATGGGTTCTTAACCTTACTGGCATCCAGTTACAATCTGCTGTGAATTCCCGAATACACAGTCTCATGAGCCAATACAAAGATGAGTTCATACACTGGGACGTCAGCAATGAAATGCTTCATTTTGATTTCTACGAGCAAAGGCTTGGATCTGATGCGACACTGCATTTCTTTGAGACTGCACATGAATCAGATCCATTATCAACCCTGTTCATGAATGACTTTAATGTTGTGGAAACATGCAGTGATGTAAATTCCACTGTAGACGCCTATATCTCACGGGTAAGAGAACTCCAACGAAATGGCATCTTTATGGATGGAATTGGCTTGGAGGGACACTTCACAGTACCCAATCCTCCCCTTATCAGAGCCATCCTAGACAAGTTGGCAACTCTTGGACTTCCCATTTGGCTTACTGAGGTTGATATAAGCAAGACAATTGATAGAGATTCACAGGCGAAATATTTGGAGGAAGTTTTGAGGGAAGGATTCTCACATCCTTCTGTGAATGGGATAATGCTTTGGACGGCATATCATCCAAATGGGTGCTACCAAATGTGCCTCACAGACAATAATTTCAATAACCTGCCAGCAGGTGATATGGTGGACAAAGTTCTTCAAGAGTGGCAAACAGGTCGTGTAGAGGGAGTGGCAGATGTGCACGGTTCCTATAGCTTTTATGGCTTCTTAGGAGAATATTCTATTACTGTCAACTATGGCAACAGGACTACACATTCAACATTCTCCCTCTCTCCAGCTAAAGAAACTAGACATTTCACCATTACACTCTGA 1680 0.4292 MQDIPFYVLILSLLLIPTSLVSPLYDGPLYDFTAYTECKEKPGEPLYGGGVLKSQQRSPPGLQDNIASSYVVNNTYVPSLLLYNLTQGTIYTFSAWVRIKGSSSDMIRATLETEKETYDCIGTVSAKLGCWSFLKGGFVLTSPSNLSIIFFQNADGKDINIEVASPSLQPFTNQQWRINQQYMINTKRKRAVTVHVSDSNGRRLQGASICIEQISKEFPFGSAIAKTILGNLPYQNWFAKRFNAAVFENELKWYATEPDEGRVNYTISDQMLQFVRTNNIVARGHNIFWEDPKYTPPWVLNLTGIQLQSAVNSRIHSLMSQYKDEFIHWDVSNEMLHFDFYEQRLGSDATLHFFETAHESDPLSTLFMNDFNVVETCSDVNSTVDAYISRVRELQRNGIFMDGIGLEGHFTVPNPPLIRAILDKLATLGLPIWLTEVDISKTIDRDSQAKYLEEVLREGFSHPSVNGIMLWTAYHPNGCYQMCLTDNNFNNLPAGDMVDKVLQEWQTGRVEGVADVHGSYSFYGFLGEYSITVNYGNRTTHSTFSLSPAKETRHFTITL 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00069 559 Gene3D - 66 164 - -
Phco7g00069 559 PRINTS Glycosyl hydrolase family 10 signature 397 409 IPR001000 GO:0004553|GO:0005975
Phco7g00069 559 PRINTS Glycosyl hydrolase family 10 signature 364 375 IPR001000 GO:0004553|GO:0005975
Phco7g00069 559 PRINTS Glycosyl hydrolase family 10 signature 282 294 IPR001000 GO:0004553|GO:0005975
Phco7g00069 559 PRINTS Glycosyl hydrolase family 10 signature 326 337 IPR001000 GO:0004553|GO:0005975
Phco7g00069 559 Gene3D Glycosidases 209 514 - -
Phco7g00069 559 SUPERFAMILY Galactose-binding domain-like 84 161 IPR008979 -
Phco7g00069 559 PANTHER GLYCOSYL HYDROLASE 78 552 IPR044846 GO:0004553|GO:0005975
Phco7g00069 559 Pfam Glycosyl hydrolase family 10 214 473 IPR001000 GO:0004553|GO:0005975
Phco7g00069 559 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 205 501 IPR001000 GO:0004553|GO:0005975
Phco7g00069 559 SUPERFAMILY (Trans)glycosidases 204 509 IPR017853 -
Phco7g00069 559 SMART glyco_10 251 502 IPR001000 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00069 Phco-Chr7 457216 459813 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00069 7 457216 459813 Phco7g00069 7 457216 459813 ECH