Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00059 ATGTCTCGCACCATTCTTTTCATGGCATTGCTTTCCATCATTGTGGCTGCGGCACATGCACGTGGTCATCATAAGGGAGCGCATGGTCGTCACATGACTGCTCAAAATGTCACTTATGATGGTAAGTCCATGTTCATCAATGGAAGGCGCGAGCTGCTCTTTTCTGGTTCCATCCATTACCCACGGAGCACACAAGATATGTGGCCAGTCCTTCTTGATAATGCAAGACGTGGAGGCATAAATGTCATTCAAACTTATGTGTTTTGGAATGCTCATGAGCCCCAACAAGGACAGTTCAACTTTGTTGGTAATTATGACTTGGTGAAGTTTATTAAACTCGTTCAAGAACATGGAATGTTTGTCACTCTCAGGGTTGGACCCTTCATCCAAGCCGAGTGGAACCACGGAGGTCTTCCATATTGGCTTAGAGAGGTTCCTGGCATCATTTTCCGCTCTGACAATGAGCCTTATAAGCAATACATGCAAGCATTCGTGACAAAGATTGTACAAATGATGAAAGATGAAAAACTCTTTGCTCCCCAAGGAGGACCCATCATCTTGGCTCAGATTGAGAATGAGTACAACCACATTCAACTTGCATATGAAGAGAAGGGAGACAGTTACGTCCAGTGGTCTGCAAACATGGCAGTAGCACTGAATGTTGGAGTTCCATGGGTCATGTGCAAGCAAAAAGATGCACCTGATCCAGTGATCAATGCATGCAATGGAAGAAATTGCGGTGATACCTTCTCAGGGCCAAACAAACCATACAAACCATCCATATGGACAGAAAACTGGACCGCTCAGTACCGAGTACATGGAGATCCACCATCCCAAAGATCCGCAGAAGATATTGCATTCTCAGTTGCTCGCTTCTTCTCCAAGGGTGGAAACTTGGTTAACTATTATATGTATCACGGTGGAACAAACTTTGGTAGAACCAGTTCTGCTTTTACCACAACTCGTTATTATGACGAGGCTCCTCTTGATGAATATGGTCTACAGAGAGAACCAAAATGGAGTCATTTGAGGGATGTGCACAAAGCTGTGCTCCTTTGTAGGAAGGCTATCCTTGGTGGCGATACCAATGTAGAAAAGTTTGACCAATTCCATGAAGTTAGAATCTTTGAGAAGCTTGGAACAAACATGTGTGCTGCTTTCATCACTAACAACCACACCACAGATGCAGCCACTATTAACTTTAGAGGCACCAACTACTTTTTACCTCCACATTCCATTAGCATCCTCCCTGATTGCAAGACCGTCGTCTACAACACGCAAAGTATTGTTTCGCAACACAATTCAAGGAACTATGAGAGGTCGCCCATTGCAAACAATTTCCAATGGGAGATGTTCAACGAGGCTATTCCAACAACCAAAAAAATGGATACATACCAGAATCTTCCGGCAGAGCTTTACAGCTTGCTCAAGGACACCACCGATTATGCTTGGTACACCACTAGCTTTGAGTTGAGTCCACAAGACTTGCCAACAAAGCCTGGAGTTATCCCAGTTCTTCGTATTATGAGTCTCGGACACTCAATGGTTGCATTTGTAAACGGAGATCTTGTTGGAACTGCTCATGGAACCCATGAAGAAAAATCTTTTGAGTTTCAACGACCAGTAGCATTTAAGGTTGGAACCAACTATATTTCCATATTGGCTAGCACAGTTGGATTACCTGACAGTGGAGCTTACATGGAACATAGATACGCAGGACCCAAGTCCATATCCATCCTTGATCTCAACACTGGAACAATTGATGTCACTAACAATATGTGGGGTCATCGGGTTGGTCTCAAAGGTGAGGGCATGAAAGTTTTCAGTGAGGAAGGATCATTGAAGGCAAAATGGAAGCCACTCACTCCAGTTCCACGCCCTTTAACCTGGTACAGGACTAGATTTGCCACCCCAGAGGGAACAGGTCCAGTTGCCATACGGATGACTGGAATGGGCAAAGGATTGATCTGGGTCAATGGTCAAAGCATTGGTCGTCACTGGATGACTTTCCTCTCCCCACTTGGAAAGCCTACTCAATCAGAGTTCCACATCCCAAGATCTTTCCTCAATCCACAGGACAACTTGCTTGTTATATTTGAAGAGGAGCCAATGACTCCAGGACAGGTTGAGGTATTGAATGTAAACAGAGACACAATTTGCAGTTTCATTGGAGAGAATGACCCTGCCAATGTGAACTCATGGGTTTCTAGGAGAGGTAGTTTCCACCCTATTGTTTCACATATTGGACCCCAAGCTGCACTAGAGTGCACTCTTGGAAAAAAAATTACGGCAGTTGAGTTTGCAAGTTTTGGCAATCCTAGTGGTTACTGTGGAGATTTTGTTTTGGGAAGCTGCAATGCTGCTGCTACGAAGCAAATTGTGGAGCAGCAATGCTTGGGCAAAGAAACTTGCACGATTGCATTAGATCGTGCAATGTTGAACCAAAATGGCGCGGATCCATGCCCAGAAATATTGGTGAAAACTCTTGCAATTCAAGCAAGGTGTTATTAG 2511 0.4436 MSRTILFMALLSIIVAAAHARGHHKGAHGRHMTAQNVTYDGKSMFINGRRELLFSGSIHYPRSTQDMWPVLLDNARRGGINVIQTYVFWNAHEPQQGQFNFVGNYDLVKFIKLVQEHGMFVTLRVGPFIQAEWNHGGLPYWLREVPGIIFRSDNEPYKQYMQAFVTKIVQMMKDEKLFAPQGGPIILAQIENEYNHIQLAYEEKGDSYVQWSANMAVALNVGVPWVMCKQKDAPDPVINACNGRNCGDTFSGPNKPYKPSIWTENWTAQYRVHGDPPSQRSAEDIAFSVARFFSKGGNLVNYYMYHGGTNFGRTSSAFTTTRYYDEAPLDEYGLQREPKWSHLRDVHKAVLLCRKAILGGDTNVEKFDQFHEVRIFEKLGTNMCAAFITNNHTTDAATINFRGTNYFLPPHSISILPDCKTVVYNTQSIVSQHNSRNYERSPIANNFQWEMFNEAIPTTKKMDTYQNLPAELYSLLKDTTDYAWYTTSFELSPQDLPTKPGVIPVLRIMSLGHSMVAFVNGDLVGTAHGTHEEKSFEFQRPVAFKVGTNYISILASTVGLPDSGAYMEHRYAGPKSISILDLNTGTIDVTNNMWGHRVGLKGEGMKVFSEEGSLKAKWKPLTPVPRPLTWYRTRFATPEGTGPVAIRMTGMGKGLIWVNGQSIGRHWMTFLSPLGKPTQSEFHIPRSFLNPQDNLLVIFEEEPMTPGQVEVLNVNRDTICSFIGENDPANVNSWVSRRGSFHPIVSHIGPQAALECTLGKKITAVEFASFGNPSGYCGDFVLGSCNAAATKQIVEQQCLGKETCTIALDRAMLNQNGADPCPEILVKTLAIQARCY 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00059 836 CDD Gal_Rha_Lectin_BGal 746 835 - -
Phco7g00059 836 ProSiteProfiles SUEL-type lectin domain profile. 746 836 IPR000922 GO:0030246
Phco7g00059 836 FunFam Beta-galactosidase 596 720 - -
Phco7g00059 836 Pfam Galactose binding lectin domain 754 835 IPR000922 GO:0030246
Phco7g00059 836 Pfam Glycosyl hydrolases family 35 43 349 IPR031330 -
Phco7g00059 836 Gene3D - 597 721 - -
Phco7g00059 836 FunFam Beta-galactosidase 33 353 - -
Phco7g00059 836 PANTHER BETA-GALACTOSIDASE RELATED 28 755 IPR001944 GO:0004553|GO:0005975
Phco7g00059 836 SUPERFAMILY Galactose-binding domain-like 591 740 IPR008979 -
Phco7g00059 836 Gene3D Glycosidases 33 352 - -
Phco7g00059 836 Pfam Beta-sandwich domain in beta galactosidase 358 428 IPR041392 -
Phco7g00059 836 SUPERFAMILY (Trans)glycosidases 34 353 IPR017853 -
Phco7g00059 836 Gene3D - 745 836 IPR043159 -
Phco7g00059 836 SUPERFAMILY Galactose-binding domain-like 413 573 IPR008979 -
Phco7g00059 836 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 182 194 IPR019801 GO:0004553|GO:0005975
Phco7g00059 836 PRINTS Glycosyl hydrolase family 35 signature 653 669 IPR001944 GO:0004553|GO:0005975
Phco7g00059 836 PRINTS Glycosyl hydrolase family 35 signature 180 195 IPR001944 GO:0004553|GO:0005975
Phco7g00059 836 PRINTS Glycosyl hydrolase family 35 signature 68 86 IPR001944 GO:0004553|GO:0005975
Phco7g00059 836 PRINTS Glycosyl hydrolase family 35 signature 317 333 IPR001944 GO:0004553|GO:0005975
Phco7g00059 836 PRINTS Glycosyl hydrolase family 35 signature 626 640 IPR001944 GO:0004553|GO:0005975
Phco7g00059 836 PRINTS Glycosyl hydrolase family 35 signature 123 142 IPR001944 GO:0004553|GO:0005975
Phco7g00059 836 PRINTS Glycosyl hydrolase family 35 signature 298 313 IPR001944 GO:0004553|GO:0005975
Phco7g00059 836 PRINTS Glycosyl hydrolase family 35 signature 47 64 IPR001944 GO:0004553|GO:0005975
Phco7g00059 836 PRINTS Glycosyl hydrolase family 35 signature 261 276 IPR001944 GO:0004553|GO:0005975
Phco7g00059 836 Gene3D - 372 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00059 Phco-Chr7 377247 381237 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00059 7 377247 381237 Phco7g00059 7 377247 381237 ECH