Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00021 ATGTTTATGCTTCCACTCAGTATAATAGCAGACCCAATGGACGCCTCAAAGGAAAACCGCCTGCCCTCGTTTTCGCTCCTGCCCTCTTCAGATCTTCAAGGGCATCCAAGAATGGAGGAGACTCTGAAGCCCCTCCATCACCGGTTGCCTCTCCGCAGCATCAATCAAAATCTTATGCATAACAAAAGCCCTGTTCATTCCCGCAAGAGCAAAGGAGACACAGTTGGGCACCACCACGCCCCTCAGCCTCATGCAACTAAGAAACAGAACCTGTTGGCCCCCAACCCCAGTTACCACTTAGACTCTGATATCGTAGATATTGACGATGATGACGAGGATGCCAGTGACAATGCAGTTCCTGTATTCGTCAAGCATACTGAAGCCATGCTCGACGAAATAGACAGGATAGAGGAAATTGAAATGGAAGATGTGCAGGAACCTGTTTTAGACATCGACGCCTGCGATAGGAAAGATCCACTTGCAGTTGTTGAGTACATTGATGATATCTACACCCTCTACAAGAAAATTGAGAATTCGAGCTGTGTCTCTCCAAATTACATGACTAGTCAATTTGACATTAATGAGAGGATGAGAGCCATTCTTATTGACTGGCTTATTGAGGTTCACTACAAATTTGAGCTTTTGGAGGAGACATTGTTCCTTACTGTCAATCTCATAGACAGGTTCCTGGAGCGTCAGGCAATGATCAGAAAGAAACTTCAGTTAGTTGGTGTAACAGCCATGCTAATAGCTTGTAAGTACGAGGAGGTCTCAGTCCCTACCGTTGAGGATTTTATTCTGATAACGGACAAGGCATATACAAGGGATGAAGTTTTAGATATGGAGAAATTGATGATGAACATCTTGCAATTCAAGTTGTCTGTGCCTACTCCATACATGTTCATGAGAAGATTTCTTAAGGCAGCTCATTCTGATAAAAAGCTGGAGCTCTTGTCCTTCTTCTTGGTTGAGCTTTGCCTGGTGGAATGCAAAATGCTGAAGTTTTCACCATCTTTGCTAGCTGCTGCAGCCATATACACAGCTCAATGTAGCATGTACCAGTTTAAGCAATGGACTAAGACTAGCGAGTGGTATACTGATTACTCAGAAGAGCAGCTTCTAGAATGCTCAAGGCTGATGGTTACTTTCCATGGGAAAGCTGGATCAGGGAAACTCACTGGTGTATATAGAAAGTACAGTACATTGAAGTATGGCTGTGCCACAAAAATAGAACCAGCTCTGTTTTTACTGGATAATTAA 1260 0.4365 MFMLPLSIIADPMDASKENRLPSFSLLPSSDLQGHPRMEETLKPLHHRLPLRSINQNLMHNKSPVHSRKSKGDTVGHHHAPQPHATKKQNLLAPNPSYHLDSDIVDIDDDDEDASDNAVPVFVKHTEAMLDEIDRIEEIEMEDVQEPVLDIDACDRKDPLAVVEYIDDIYTLYKKIENSSCVSPNYMTSQFDINERMRAILIDWLIEVHYKFELLEETLFLTVNLIDRFLERQAMIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYTRDEVLDMEKLMMNILQFKLSVPTPYMFMRRFLKAAHSDKKLELLSFFLVELCLVECKMLKFSPSLLAAAAIYTAQCSMYQFKQWTKTSEWYTDYSEEQLLECSRLMVTFHGKAGSGKLTGVYRKYSTLKYGCATKIEPALFLLDN 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00021 419 SMART cyclin_7 300 382 IPR013763 -
Phco7g00021 419 SMART cyclin_7 203 287 IPR013763 -
Phco7g00021 419 FunFam G2/mitotic-specific cyclin-1 280 408 - -
Phco7g00021 419 Gene3D - 182 294 - -
Phco7g00021 419 PANTHER CYCLINS 113 401 IPR039361 -
Phco7g00021 419 SMART Cyclin_C_2 296 413 IPR004367 -
Phco7g00021 419 MobiDBLite consensus disorder prediction 57 93 - -
Phco7g00021 419 Pfam Cyclin, C-terminal domain 296 411 IPR004367 -
Phco7g00021 419 SUPERFAMILY Cyclin-like 295 412 IPR036915 -
Phco7g00021 419 ProSitePatterns Cyclins signature. 198 229 IPR006671 -
Phco7g00021 419 MobiDBLite consensus disorder prediction 66 80 - -
Phco7g00021 419 Pfam Cyclin, N-terminal domain 168 294 IPR006671 -
Phco7g00021 419 CDD CYCLIN_AtCycB-like_rpt1 146 291 - -
Phco7g00021 419 SUPERFAMILY Cyclin-like 157 293 IPR036915 -
Phco7g00021 419 PIRSF Cyclin_A_B_D_E 28 419 IPR046965 GO:0016538|GO:0044772
Phco7g00021 419 Gene3D - 168 407 - -
Phco7g00021 419 CDD CYCLIN_AtCycB-like_rpt2 296 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00021 Phco-Chr7 156394 158735 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00021 7 156394 158735 Phco7g00021 7 156394 158735 ECH