Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g03230 ATGAAGTTACTTGGGTGGATGCACCGAAAATTTCGCCAGAATTCCGCTGAACCCTTCAAAGACTTAGTCATCGGGACTTGTGATGATGAACACAACTATCCGAATCCCAAAGGAAGCTTTGGGAATTACAAACATGTCAAACAAACTCAGAAAGAGCAGAACCTAAGAAAATCTTTCGCTGGTGTGGAGGACGATGAGTATGAGGAAGATTCAGCGGGTGCCATGTACGAGCTGTTCCACGGGTTCCTGGCAATTGGAACTCTGGGTTCGGAGCAGGTTGTTAGTGATCCATCAACAACGCCAACATTTGCAATATCTGTGGAGAACATTACTGAAAAGGAAGATGAAGTGACTGAGAACGAACTGAAGCTGATAAACGATGAGCTAGAGAAAGTTCTGGGAGCGGATGATGAGTCGTCATGTGGGAGAAACAGCCATGTGAGCAATGGGAGAAGCAGCCATGGAAGCATAATAACCCTGAGCGGGAAGCCGTTGTTGGAAGGTGGAGGAGAATCAAATGGAAATGGAAGTGCAGTTTGTCCTCTTCAGGGGTATCTCTTTGGATCGGCAATTGAGTTGTCAGAAACCACAACTGTGGCTGTGGCAAAGCAGAAGGAGCACAGGACGTCGCTCGGGGAGCTGTTCCAGCGAAGCAAGCTGGCAGAGGAGACCGTTGGAGGAAATAAGGATGATAACAAGAGAAGTGAGAGGGAAGCAGACAAATCTGCCATGAATCTCATGAAAAAAAAGCTCAAGAAAAGAATGCTTCACACTTCTTCCCGAAGCTCCTCCTCAGCCACTGCTGCAGCCCAATCTGTTGATTCTGCTTCAGCTGAGAGAAAACTGCATAAGATTCTGCATATGTTTCACAGAAAAGTTCATCCTGAAAATTGGACGGGTGCACAGAAGTGTGATAAATACCAAAAGAATGAGAACAAGAAGAAAACAATTAATGATGTGGTGCATGGAGAGGAAGATATAATGATACACCCCAAAAGAGCAGTGTCAAAGGAAAACATCATGCGACAATATTATAAGATTCAACCCAATCCATTCCACTTTGCTCTTGGCTGTGAAGATTCATCTGACAACAAGGAGCACTGGATCAAAACAGATGCCGATTGCGGTGGTCGGAAGAGAGAGATGCCGAAGAGAACAACGCACACTTACTCAAGCGAGGATGCGGCTCCGGAGGGTCCACACTCCGATCTCTTTGTTTATTACTGCAAACACTGCGCTTCCCATGTCCTCATCACTGATACCCAATTGCAGAAAATGCCCAAAAGAAAAACCGACAAAGCTTATGTACTCGACAAGACCAAACATCTCGCCCGATTCAACGTTCACCACGCCGGAAAAGTTCTCTTAAAGAGAGGCCAGGGCAAATTGGAGAAACAATTCCGCATGAACTGTATGGGCTGTGGTCTTTTCGTTTGTTATCGCGCCGACCACGATTTCGACTCTTCCTCTCTCATCTACGTCCTTGATGGTGCCCTCAGCACTGTTGCTGCCGAAACCAACCCACAGGATGCCCCCGTTCCACCCTGTATATCCCAGCTTGAAGGAGGACTTGTTCAGGTTGCTATAGAAGTTGAAGATCGTGCACAACGTTCCGCAATCACCAGAGTAAATGCTGATGATGTTCGAGTCACTGTTGCTGCTCCTGCTGCCCGTGGAGAGGCCAACAACGAGCTTTTGGAATTTATGGGAAAAGTTTTGGGTTTGAGGTTGAGTCAGATGACTCTTCAGAGAGGATGGAATAACAAATCAAAGCTTCTTGTGGTGGAGGATTTGACTGCTAGACAAGTTTATGAGAAACTTTTGGAGGCTGTGCAACCTTAA 1842 0.4636 MKLLGWMHRKFRQNSAEPFKDLVIGTCDDEHNYPNPKGSFGNYKHVKQTQKEQNLRKSFAGVEDDEYEEDSAGAMYELFHGFLAIGTLGSEQVVSDPSTTPTFAISVENITEKEDEVTENELKLINDELEKVLGADDESSCGRNSHVSNGRSSHGSIITLSGKPLLEGGGESNGNGSAVCPLQGYLFGSAIELSETTTVAVAKQKEHRTSLGELFQRSKLAEETVGGNKDDNKRSEREADKSAMNLMKKKLKKRMLHTSSRSSSSATAAAQSVDSASAERKLHKILHMFHRKVHPENWTGAQKCDKYQKNENKKKTINDVVHGEEDIMIHPKRAVSKENIMRQYYKIQPNPFHFALGCEDSSDNKEHWIKTDADCGGRKREMPKRTTHTYSSEDAAPEGPHSDLFVYYCKHCASHVLITDTQLQKMPKRKTDKAYVLDKTKHLARFNVHHAGKVLLKRGQGKLEKQFRMNCMGCGLFVCYRADHDFDSSSLIYVLDGALSTVAAETNPQDAPVPPCISQLEGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLGLRLSQMTLQRGWNNKSKLLVVEDLTARQVYEKLLEAVQP 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g03230 613 Gene3D - 514 612 IPR036591 -
Phco6g03230 613 MobiDBLite consensus disorder prediction 258 274 - -
Phco6g03230 613 FunFam UPF0235 protein isoform X1 513 612 - -
Phco6g03230 613 MobiDBLite consensus disorder prediction 222 275 - -
Phco6g03230 613 MobiDBLite consensus disorder prediction 136 156 - -
Phco6g03230 613 PANTHER OS07G0295200 PROTEIN 382 613 - -
Phco6g03230 613 Hamap UPF0235 protein YggU [yggU]. 521 609 IPR003746 -
Phco6g03230 613 MobiDBLite consensus disorder prediction 376 397 - -
Phco6g03230 613 MobiDBLite consensus disorder prediction 223 246 - -
Phco6g03230 613 NCBIfam DUF167 family protein 525 594 IPR003746 -
Phco6g03230 613 SMART DUF167_2 521 597 IPR003746 -
Phco6g03230 613 Pfam Uncharacterised ACR, YggU family COG1872 525 596 IPR003746 -
Phco6g03230 613 SUPERFAMILY YggU-like 514 600 IPR036591 -
Phco6g03230 613 MobiDBLite consensus disorder prediction 141 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g03230 Phco-Chr6 52760997 52766379 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g03230 6 52760997 52766379 Phco6g03230 6 52760997 52766379 ECH