Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g03061 ATGCAATCTATCAGGAATTCCTTCAAATCTTATGGTTCGTTCAAACAGTCAAAAAGGTTTTCCGGCGCCGGAAACCACGATTCCGATCACGAGCAGCTGCCCATTCTCCTCGACCAAGAATCGCACCGCCACAGCGCAATGCCCGCCGGCGACTACGTCGTCAAAATAGACGACGGCGCCAACCTCCCGCAGGGCAACAGGATTTGGCGCGAGTCAAGCTACGACTTTTGGAAGGGCGAAAGCTCCTCCTCCGCCGCTAACGACCAGAGTTTTGATTTTCGGCAGACGGAGGACCCGCCGTCGCAGCTGATAGGGCGGTTCCTCCACAAGCAGCGGGCCTCCGGCGAGATGCAGCTGGACATGGACTTGGAAATGGAGGAGCTCCAGCGCGACGCCGACGAACGAAGGTTGACGCCGGTGGAGGAGTCTCCGGTGAACCTTCGCGTGTCCAGGGAGCTGAAGGTCTCCTTCGATGAACCCCTTTCCAATTCGAATCTCCTCGAACCGCAGACCGAGACCTTCAGGAGAAGGCACAGCAAGGAATCGCCGACGATGACGGACTTCCAACGCCCTCCGCAGGTGCCGCAGTACGACCGTCGCCGCTCGCCTTCGCTGTCTCCTGTCAGCGATAGCGAGGTCCTTCGGTGCACCTCAAACGCTTCCTTCGAGAGAAACCTCTCCATGCAGAGAAAATCTGCGTTGTTGAAGGCGAAAACGAGATCCAGGTTGCTGGACCCGCCAGATGAACACGACAGAAGATCGGGCCGGGTTATGAAATCGGGTCAGCTCGTTTCCGGGTTTTTAGGGAAGAAGGGTGATGAGGAGGAGGACGATCCGTTTTTGGAAGAGGATATTCCTGATGAGTTTACGAAGACTCATTTCAGCTTCTGGATTCTTCTGGAGTGGGTGAGTTTGGTTTTGATCATTGGGTTGTTGATAACCACCCTTTGCATTCCCCTTCTAAGGAGGAAGCATCTGTGGCAGCTTAAGTTGTGGAAATGGGAGGTTATGGTTCTGGTTTTGATCTGTGGGAGATTGGTGTCTGATTGGGTTGTTAGGGTTGCTGTGTTCTTCATTGAGAGGAACTTCCTCTTGAGGAAGAGGGTGTTGTATTTTGTGTACGGTGTGAGGAAGGCGGTTCAGAATTGTGTTTGGTTGGGGCTCGTGTTGATTGCATGGCATTTGTTGTTTGACCAGAGGGTGCAGAGGGAGACCAACAGTGATATCCTCGAGTATGTTAATAAGGTGTTGGTGTGTTTCCTTGTGGGGACTCTGGTGTGGTTGGTCAAGACTCTCATGGTTAAGGTCTTGGCCTCTTCTTTCCATGTCAGTACGTACTTTGATAGGATTCAGGAGTCACTGTTTAATCAGTTTGTGATTGAGACGCTTTCGGGGCCTCCATTGGTGGAGATTCAGAGGGCTGAGGAGGAGGAGGAGAGGCTTGCTGATGAGGTCCAGAAGCTGCAAAATGCTGGGGTTACCATACCCCCTGACCTCAGGGAAACTGCTTTTTCTAATATCAAGAGTGGGAGGATCAGGAGTGGAGTGCTCAAGAGCCCCAGAGCTAAGAGTGGCAAGTTTTCCCGACCTCTTTCCAAGAGGTCCGACGATGGTAATGTCATCACCATTGATAACCTGCATAAGCTCAACCCCAAGAATGTGTCTGCCTGGAATATGAAAAGGTTGATGAACATGGTCCGGCTCGGGGCTTTGACTACCTTGGATGAACAGATAATTGATAGCGCCAATGAGGATGAGAGTGCCACGCAAATTAGAAGTGAAAACGAGGCAAAAGCTGCTGCTAAGAAAATATTTGAGAATGTTGCTAGGCGTGGGTGCAGGTATATATACCCGGATGACTTGATGCGATTTATGCAAGAAGACGAAGCTGCAAAAACCATGAATCTCTTTGAAGGAGCATCTGATTCTGGGAGAATAAGCAAAGGAGCCTTGAAGAACTGGGTGGTCAATGCCTTCAGGGAAAGGAGAGCGCTTTCTTTGACGCTGAATGACACAAAAACGGCAGTGAACAAACTTCATCGAATGCTCAATTTTATAGTTGCAATTGTTGTACTGATTATTTGGCTCTTGATATTGGAGCTTGCCACCACCAAATTTCTTGTCTTTTTGAGTTCACAGGTTGTCTTGGTTACATTTATATTTGGAAACACCTGCAAGACCATATTTGAAGCAATTATTTTCCTATTTGTCATGCACCCATTTGACGTGGGAGATAGATGTGAAATTGACGGGATTCAGATGGTGGTAGAAGAAATGAACATATTGACAACCATATTTCTGAAATTTGATAATCATAAGGTGATCATCCCTAACAGTGTCCTTGCTACCAAGGCTATATTTAACTATTACAGGAGTCCTGACATGTCAGATATTATCGAATTCTATGTACACATATGCACCCCAGTTGAAAAGATTTCACTTATTAAACACAGAATAAATAGTTACTGTGAAAACAAGAAGGAGCACTGGTATCCTTCACCTATTATAGTAATCAGGGATTATGATCAATTAGACATGGTGAAAATGGCTATCTGGCCCAATCATAAAATGAACTTCCAAGATCAGGGAGAAAGGTATATAAGGAGATCCCTTTTGCTTGAAGAGTTGCTTAAGACTTTCAGGGAGCTGGACCTTAATTACCGTCTCCTCCCCATGGACATTAACGTCAGATCCGTGCCTACCTCTTCTGAACGGCTTCCACCTAGTTGGTCAACAATTCCAGGTTGA 2748 0.4778 MQSIRNSFKSYGSFKQSKRFSGAGNHDSDHEQLPILLDQESHRHSAMPAGDYVVKIDDGANLPQGNRIWRESSYDFWKGESSSSAANDQSFDFRQTEDPPSQLIGRFLHKQRASGEMQLDMDLEMEELQRDADERRLTPVEESPVNLRVSRELKVSFDEPLSNSNLLEPQTETFRRRHSKESPTMTDFQRPPQVPQYDRRRSPSLSPVSDSEVLRCTSNASFERNLSMQRKSALLKAKTRSRLLDPPDEHDRRSGRVMKSGQLVSGFLGKKGDEEEDDPFLEEDIPDEFTKTHFSFWILLEWVSLVLIIGLLITTLCIPLLRRKHLWQLKLWKWEVMVLVLICGRLVSDWVVRVAVFFIERNFLLRKRVLYFVYGVRKAVQNCVWLGLVLIAWHLLFDQRVQRETNSDILEYVNKVLVCFLVGTLVWLVKTLMVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVEIQRAEEEEERLADEVQKLQNAGVTIPPDLRETAFSNIKSGRIRSGVLKSPRAKSGKFSRPLSKRSDDGNVITIDNLHKLNPKNVSAWNMKRLMNMVRLGALTTLDEQIIDSANEDESATQIRSENEAKAAAKKIFENVARRGCRYIYPDDLMRFMQEDEAAKTMNLFEGASDSGRISKGALKNWVVNAFRERRALSLTLNDTKTAVNKLHRMLNFIVAIVVLIIWLLILELATTKFLVFLSSQVVLVTFIFGNTCKTIFEAIIFLFVMHPFDVGDRCEIDGIQMVVEEMNILTTIFLKFDNHKVIIPNSVLATKAIFNYYRSPDMSDIIEFYVHICTPVEKISLIKHRINSYCENKKEHWYPSPIIVIRDYDQLDMVKMAIWPNHKMNFQDQGERYIRRSLLLEELLKTFRELDLNYRLLPMDINVRSVPTSSERLPPSWSTIPG 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g03061 915 Coils Coil 468 491 - -
Phco6g03061 915 MobiDBLite consensus disorder prediction 162 213 - -
Phco6g03061 915 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 40 910 IPR016688 -
Phco6g03061 915 MobiDBLite consensus disorder prediction 80 97 - -
Phco6g03061 915 MobiDBLite consensus disorder prediction 80 101 - -
Phco6g03061 915 Gene3D - 740 789 IPR023408 -
Phco6g03061 915 MobiDBLite consensus disorder prediction 199 213 - -
Phco6g03061 915 SUPERFAMILY Sm-like ribonucleoproteins 730 789 IPR010920 -
Phco6g03061 915 PIRSF Memb_At2g17000 39 915 IPR016688 -
Phco6g03061 915 FunFam Predicted mechanosensitive ion channel 740 789 - -
Phco6g03061 915 Pfam Mechanosensitive ion channel 682 830 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g03061 Phco-Chr6 51608334 51611975 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g03061 6 51608334 51611975 Phco6g03061 6 51608334 51611975 ECH