Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g03059 ATGATGAATGGCTTACAGTGTCCTCAGCAAGGGCTGCTATGGAGATTGAAACAACATGGTGGCCCAGTTACCCCAGTTGCAAGGATTACAATGGAAACTTCCACGCTAACCAAACAAGGCCAACGATTTCTGACAAAGCTAACCACCTCCTCCGCCGCCACCGACAACCTTATCCGAAGATTCGTCCAAGGTTCTCCCAAATCTGTGGTTCTCACCACTCTCTCACACCTCCTCTCACCCTCCACCTCCTATCCACAACTCTCTTCCATCGCTCTCCCCCTTTACGGAAGAGCCACCCAAGCACCGTGGTTCACTTGGAACTCCACCACCGTGGCCGAGCTCGCCGCGCTTCTCCACAAACTGGGCCACCAGGCCCAATCCGAAGCCCTAATTTCCGAGGCCATTTCCAAGCTACAGTCTCGCCAACGCGACCTCGTTGTTTTCTACGGTAGACTCGCGCAAGCGTACTCCAAACGAAAATCTGAAATCGGCTTCGACGTGGCCTACGGTTACCTCAACAACCTGCTCCGAACATCGGAATCGGTGCACGTGAAACGCAGGGCGTACGAGTACATGGTGAGTGGGCTGTGTTGCATGGACAGGCCCGGTGAGGCGGAGGAATTAGTTATTGGGCCTGGGGCTGGGCTTGGGCTTAAACCCTCTGGTTTTGAATTGAAGTCGATTGTGTACGGGTATGGAAGGTTGGGGTTGTTTGAGGATATGCGGAGAGTGGTGGAAGAGATGGAGAAGAGAGGGTTTGTGGTTGACACGGTTTGCTGCAACATGGTTGTTTCGGCTTACGGCGTTCACGGGGAGCACGTGGAAATGGTGAGATGGCTTCGGAGGATGAGGGATTCAGGGATTCCGTTTTCTGTGAGGACTTATAATTCCGTTTCGAATTGTTGCCCTAGGGTTTTGAGAATGGTTGGGGGAATGAGCGAATTGGCGTTGTCGATTGAGGAATTGAATGAGGGTTTGGAAGGAGGGGAGGGAATGGTGGTGAGGGAGCTGTTGGGGTGTAGTGGGATTTTGGAGGAGGTGATGGTGTGGGAGTCGTTGGAGGTGAAGTTGGATTTGCATGGGTTTCACTTGGGTGGGGCTTATTTGGTTGTTTTGGTTTGGTTGGAGGAGATGTGGAGAAGGTTGAATGGTTTGAATTGTGGGGTTCCGGCGGAAGTTACGGTGGTTTGTGGGTTGGGAAATCACAGCAGTGTTCGAGGGGAATCGAAGGTGAGAGTGTTGGTGCAGAAGATGATGGTGAATATGGGAAGTCCTTTGAAGGTTGATAGGAAGAACAATGGGTGCTTTGTTGCTAAAGGAAAAGCTGTTCAAAATTGGTTGTGTGAAATGAAGAAGGCACCTCTGAGGGAATCTGCTTCTCTTTGA 1386 0.5144 MMNGLQCPQQGLLWRLKQHGGPVTPVARITMETSTLTKQGQRFLTKLTTSSAATDNLIRRFVQGSPKSVVLTTLSHLLSPSTSYPQLSSIALPLYGRATQAPWFTWNSTTVAELAALLHKLGHQAQSEALISEAISKLQSRQRDLVVFYGRLAQAYSKRKSEIGFDVAYGYLNNLLRTSESVHVKRRAYEYMVSGLCCMDRPGEAEELVIGPGAGLGLKPSGFELKSIVYGYGRLGLFEDMRRVVEEMEKRGFVVDTVCCNMVVSAYGVHGEHVEMVRWLRRMRDSGIPFSVRTYNSVSNCCPRVLRMVGGMSELALSIEELNEGLEGGEGMVVRELLGCSGILEEVMVWESLEVKLDLHGFHLGGAYLVVLVWLEEMWRRLNGLNCGVPAEVTVVCGLGNHSSVRGESKVRVLVQKMMVNMGSPLKVDRKNNGCFVAKGKAVQNWLCEMKKAPLRESASL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g03059 461 SMART SMR_2 354 441 IPR002625 -
Phco6g03059 461 NCBIfam pentatricopeptide repeat 258 289 IPR002885 -
Phco6g03059 461 NCBIfam pentatricopeptide repeat 227 257 IPR002885 -
Phco6g03059 461 SUPERFAMILY SMR domain-like 355 439 IPR036063 -
Phco6g03059 461 ProSiteProfiles Smr domain profile. 357 441 IPR002625 -
Phco6g03059 461 PANTHER OS03G0856100 PROTEIN 89 450 - -
Phco6g03059 461 Pfam PPR repeat 258 288 IPR002885 -
Phco6g03059 461 Pfam PPR repeat 227 253 IPR002885 -
Phco6g03059 461 Gene3D Tetratricopeptide repeat domain 215 308 IPR011990 GO:0005515
Phco6g03059 461 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 221 255 IPR002885 -
Phco6g03059 461 Gene3D - 355 439 IPR036063 -
Phco6g03059 461 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 256 290 IPR002885 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g03059 6 51588906 51590361 Phco6g03059 6 51588906 51590361 ECH