Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g03053 ATGGGCAGCCCAAAGAAAGTGTCACCATCAACAAGAAGCCCAAAGAAAAACTCAAGAACTCTTCATGATCTCTTTGTGCAGGAAAGTCCTCACTTTACCATCACATCTTCTTCCCCCACTTCAGGAAATGAAGAACTTCTCTCCACTATTTCTTATTGCACATTTGTTTTCACCTTCACTGACCCTTCAGAATCTCCGGCACAAAGAGACTCAAAGAGGCTTCAACTCACAAGACTCGTCTCTATATTGAAGTCTTCCAAGAAACCAGTGCATGGAAAAGTTTTGGGGGCTCTAGTGACCATGATATCTGCCAACCTCTTCAGGCCACTCCCTCCACCTTCCAGCCCCTCCGCAATTACAGATTTGCCTGAAGAAGAAGACCCCGTCTCTATATTTTCTCCTCTATGGTCACATCTCCAAATAGTTTACGAGATACTTCTCAAGCTTGTTAACAGCACAGACCAAAACATACTGAGAGAGTGCATAGATCATTCTTTCCTCCGCAACCTGCTAGCACTCTTCCAGTCAGAAGATCCAAGGGAACGTGAGACTTTGAAAAATGTGTACCACAAGATGTACTCCAAGTTCATTTCTGATCGTTCCTTCATGAGGAAATCAATGACCGAGGTGCTCTTGAATTACGTTTTTGAGACAGAGAAGCATCCGGGTATTGCAGAGTTGCTTGAGATATGGGGAACCATAATCAATGGCTTTACCGTGCCACTGAAGGAAGAGCACAAACTGTTCCTGATGAGAGTGCTGATTCCTCTACACAAAACCAAGGGGATGCAAGTGTACCATAGGCAATTGGCCTATTGCGTGTCACAGTTTGTTCAGAAGGAGCCTATGCTTGGAGGGGTTGTTGTTAGAGGGATTTTGAGGTATTGGCCTGTCACAAACTGTCAAAAAGAAATTTTGCTAATTGGGGAGTTGGAAGATCTGGTTGAGAATTTAGACCCTGACCAGTATCGTAAGTTGGCCTTGCCCTTGTGTACCCAGATTACCAAATGCATAAACAGTTGGAATTCCCAGGTAGCGGAGCGTGCACTCTATGTGTGGAACAATGAGCAGTTCGTGAAAATGGCACTGATAGGAACAGTGGAAGTGTTTAATGTGATTGTAGAAGGCATGGAAAAGAACCTGAAGTGGCATTGGAGCAAGAGCGTTAGGCAACTAACAGAAAGTGTTAAGCTGATGCTGGAAGAAATGGACCCAGATCTGTATTCGAAGGGTCTCATGGACATGGAAGCTAAAGAATCAATGGCACATCAAGAAGATATCAAAAGAAAAAAGAGATGGGAAAGAATAGAATTGGAAGCTGCCAAGAGTCAGTTTCTCAACCCACAACGTTATATACCCTCCATAGCCTTTTTGCCTGCAAGAAATGCCCCTCAGTCGTCGTCGGATAGGTCAATCGAGAAACCGGAGAATGATAACAAGAATAACGCCATGTCCGACGAGTTGGAGGTGGGGATATTTAGATCCACGTATGGGGGATTAGTGAGTGACGAAAACCAAACGGTTACTAAAAGTTATTTTAATTTTGGATTTGCAATAAAGAAGTTTGGGTTATATACTGTTCGGGATAGCGAGGAAGCGATTTGA 1605 0.4374 MGSPKKVSPSTRSPKKNSRTLHDLFVQESPHFTITSSSPTSGNEELLSTISYCTFVFTFTDPSESPAQRDSKRLQLTRLVSILKSSKKPVHGKVLGALVTMISANLFRPLPPPSSPSAITDLPEEEDPVSIFSPLWSHLQIVYEILLKLVNSTDQNILRECIDHSFLRNLLALFQSEDPRERETLKNVYHKMYSKFISDRSFMRKSMTEVLLNYVFETEKHPGIAELLEIWGTIINGFTVPLKEEHKLFLMRVLIPLHKTKGMQVYHRQLAYCVSQFVQKEPMLGGVVVRGILRYWPVTNCQKEILLIGELEDLVENLDPDQYRKLALPLCTQITKCINSWNSQVAERALYVWNNEQFVKMALIGTVEVFNVIVEGMEKNLKWHWSKSVRQLTESVKLMLEEMDPDLYSKGLMDMEAKESMAHQEDIKRKKRWERIELEAAKSQFLNPQRYIPSIAFLPARNAPQSSSDRSIEKPENDNKNNAMSDELEVGIFRSTYGGLVSDENQTVTKSYFNFGFAIKKFGLYTVRDSEEAI 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g03053 534 MobiDBLite consensus disorder prediction 1 15 - -
Phco6g03053 534 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 39 438 - -
Phco6g03053 534 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 25 443 IPR002554 GO:0000159|GO:0007165|GO:0019888
Phco6g03053 534 MobiDBLite consensus disorder prediction 1 20 - -
Phco6g03053 534 Gene3D - 39 438 IPR011989 -
Phco6g03053 534 PIRSF PP2A_B56 4 510 IPR002554 GO:0000159|GO:0007165|GO:0019888
Phco6g03053 534 MobiDBLite consensus disorder prediction 461 485 - -
Phco6g03053 534 SUPERFAMILY ARM repeat 44 418 IPR016024 -
Phco6g03053 534 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 35 440 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g03053 Phco-Chr6 51561255 51563684 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g03053 6 51561255 51563684 Phco6g03053 6 51561255 51563684 ECH