Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g03051 ATGCTTAGCTCATTAGTTTACATGTTTATAAATAGTTGGTTCAGCTGTTGCGTTTCATTTAAAAGCGGTGTTGTTCGCTTTCTTTCTCTCTCTCTTTCTGTTGCGCACACAAATATTCCAAAAACCCCTCTCTCTGCGATTGAACTCAATTCGCGGGGGCGGATTCCGGTGGCGATGGCGGCGGCGGCGGCGACGACGACGACTCCAGCGTGGCAGCCTCAGGAGCAAGGGTTCAAGGAGATCTGCGGCCTCCTCGAGCAGCAGATTTCGCATTCTTCTTCCGCCGATAAGGCTCAGATTTGGCAACACCTTCAGCGCTACTCGCACCTTCCTGACTTCAACAATTACCTCGCCTTCATATTCTCCCGTGCCGAGGGAAAATCAGTGGAAGTTCGTCAGGCTGCAGGGTTGTACCTGAAGAATAACCTCAGAAATGCTTATAAATCTATGCAGCCTGCCTACCAACAGTATGTGAAATCGGAGTTGCTGCCTTGTCTTGGTGCAGCGGATAAGCACATAAGGTCTACAACAGGAACTATTATTAGTGTTGTTGTTGAAATAGGAGGAGTTGTTGGGTGGCCTGAATTGTTGCAAGCCCTCGTAAATTGCTTGGACAGCAACGATCTAAATCACATGGAAGGTGCAATGGATGCATTATCCAAGATTTGTGAAGATATTCCTCAATATCTTGATTCTGATGTACCGGGTTTAGCAGAACGCCCCATTAACATATTTCTTCCTAGATTATTTCGGTTTTTCCAATCTCCTCATGCTTCATTAAGAAAGCTATCACTAGGTTCTGTAAATCAATACATTATGTTAATGCCTTCTGCTCTATATGTATCCATGGATCAATACCTTCAAGGTCTGTTTGTCCTCTCAAATGATCCTTCTGCTGAAGTGCGGAAGTTGGTTTGCGCGGCATTTGTTCAGCTAATTGAAGTCCGTCCATCTTTCTTGGAGCCACATTTGAGGAATGTGATTGAATACATGTTGCAAGTCAACAAGGACACAGATGAAGAAGTAGCCCTCGAAGCCTGTGAATTTTGGTCTGCTTATTGTGATGCTCAACTGCCACCTGAAAACTTAAGAGAATTCTTGCCTCGTCTTATTCCAGTATTGTTGTCAAACATGGCTTATGCTGATGATGACGAATCACTTATTGAAGCTGAGGAAGATGGATCTCAACCTGACCGAGATCAGGATCTTAAGCCTCGATTTCATGCATCAAGATTTCATGGATCTGATGAAGTAGAAGATGACGATGATGATGTTGTCAACACATGGAATTTACGGAAATGCAGTGCAGCTGCTCTTGATATTCTTTCAAATGTGTTTGGAGATGCGATTCTTCCAACACTTATGCCTATTGTTGAGGCTAAGTTGTCTGCTGGTGGGGATGATGCTTGGAAAGACCGGGAAGCTGCTGTCTTGGCCCTTGGTGCCATAGGTGAAGGTTGCATCAATGGTCTTTATCCTCATCTGCTGGAGATTGTGGCCTTTCTTATCCCGCTACTTGATGATAAGTTTCCTCTGATACGAAGTATTTCATGCTGGACACTATCTCGTTTTAGCAAATTTATTGTTCAGGGTATTGGACATCCTAAAGGCTATGAACAATTTGATAATGTTCTTATGGGGCTTCTACGAAGAATTTTGGATGACAATAAGCGGGTACAAGAGGCTGCTTGTTCAGCTTTTGCAACCCTGGAAGAGGAGGCTGCTGAAGAGTTGGCACCACGCTTGGAAATCATACTGAAGCATCTGATGACTGCATTTGGGAAATATCAACGGCGAAACCTCAGAATTGTATACGATGCAATTGGAACTCTAGCTGAAGCTGTTGGAGGAGAGTTGAATCAGCCTGTTTATCTTGACATTCTAATGCCACCATTAATTGAGAAGTGGCAGCAACTTTCAAATTCAGACAAAGATCTTTTTCCACTCCTGGAATGCTTTACATCTATAGCTCATGCTCTGGGTACTGGTTTCACTCAATTTGCTGAACCTGTATTTAGGAGGTGCATAAATATAATCCAGACCCAACAATTTGCTAAGGCTGATTCTACTACAACTGGGGTTCAGTATGACAAGGAGTTCATTGTGTGTTCTCTTGATTTGCTTTCTGGACTAGCAGAGGGTCTTGGCAGTGGAATAGAGAGTTTGGTTGCACAATGTTCTCTGAGAGATCTACTTCTGCATTGTTGTGTGGATGATGCTTCTGATGTTCGGCAGAGTGCCTTTGCCTTACTTGGAGACCTGGCACGAGTGTGCCCGGTCCATTTGCACCCTCGTTTGTCTGAATTTCTTGAGGCTGCTGCCAAACAGCTGGAGATTTCTAAGGTAAAGGAGGCCATTTCAGTAGCAAATAATGCATGCTGGGCAATTGGAGAATTAGCAGTGAAGGTTCGTCAAGAAATTTCTCCTGTTGTCTTGACTGTAATTTCATGCCTGGTTCCCATTCTTCAGCACGCAGAGGGACTCAATAAGTCACTTATAGAGAATAGCGCAATAACACTGGGGAGGCTTGCATGGGTCTGTCCAGAGCTTGTATCACCACATATGGAGCATTTCATGCAATCTTGGTGCACTGCTTTGTCAATGATACGAGATGATGTTGAGAAAGAGGATGCTTTTAGAGGCCTATGCGCTATGGTCAAAGCTAATCCTTCTGGAGCTCTAAGCTCGCTTGTTTACATGTGCAAAGCGATTGCAAGTTGGCATGAAATAAGGAGTGAAGATTTACACAATGAAGTCTGCCAGGTCTTGCATGGGTATAAACAGATGCTTCGCAATGGAGCGTGGGATCAGTGTATGTCTGCTTTGGAGCCTCCAGTAAAAGAAAAGCTTTCAAAATATCAAGTATAG 2868 0.44 MLSSLVYMFINSWFSCCVSFKSGVVRFLSLSLSVAHTNIPKTPLSAIELNSRGRIPVAMAAAAATTTTPAWQPQEQGFKEICGLLEQQISHSSSADKAQIWQHLQRYSHLPDFNNYLAFIFSRAEGKSVEVRQAAGLYLKNNLRNAYKSMQPAYQQYVKSELLPCLGAADKHIRSTTGTIISVVVEIGGVVGWPELLQALVNCLDSNDLNHMEGAMDALSKICEDIPQYLDSDVPGLAERPINIFLPRLFRFFQSPHASLRKLSLGSVNQYIMLMPSALYVSMDQYLQGLFVLSNDPSAEVRKLVCAAFVQLIEVRPSFLEPHLRNVIEYMLQVNKDTDEEVALEACEFWSAYCDAQLPPENLREFLPRLIPVLLSNMAYADDDESLIEAEEDGSQPDRDQDLKPRFHASRFHGSDEVEDDDDDVVNTWNLRKCSAAALDILSNVFGDAILPTLMPIVEAKLSAGGDDAWKDREAAVLALGAIGEGCINGLYPHLLEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQGIGHPKGYEQFDNVLMGLLRRILDDNKRVQEAACSAFATLEEEAAEELAPRLEIILKHLMTAFGKYQRRNLRIVYDAIGTLAEAVGGELNQPVYLDILMPPLIEKWQQLSNSDKDLFPLLECFTSIAHALGTGFTQFAEPVFRRCINIIQTQQFAKADSTTTGVQYDKEFIVCSLDLLSGLAEGLGSGIESLVAQCSLRDLLLHCCVDDASDVRQSAFALLGDLARVCPVHLHPRLSEFLEAAAKQLEISKVKEAISVANNACWAIGELAVKVRQEISPVVLTVISCLVPILQHAEGLNKSLIENSAITLGRLAWVCPELVSPHMEHFMQSWCTALSMIRDDVEKEDAFRGLCAMVKANPSGALSSLVYMCKAIASWHEIRSEDLHNEVCQVLHGYKQMLRNGAWDQCMSALEPPVKEKLSKYQV 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g03051 955 PANTHER IMPORTIN BETA 80 931 IPR040122 GO:0006606
Phco6g03051 955 Pfam HEAT-like repeat 470 523 - -
Phco6g03051 955 Gene3D - 68 955 IPR011989 -
Phco6g03051 955 FunFam Transportin-1 68 955 - -
Phco6g03051 955 ProSiteProfiles Importin-beta N-terminal domain profile. 100 168 IPR001494 GO:0006886|GO:0031267
Phco6g03051 955 SUPERFAMILY ARM repeat 71 947 IPR016024 -
Phco6g03051 955 Pfam Importin-beta N-terminal domain 101 167 IPR001494 GO:0006886|GO:0031267
Phco6g03051 955 SMART IBN_N_2 100 168 IPR001494 GO:0006886|GO:0031267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g03051 6 51545267 51560427 Phco6g03051 6 51545267 51560427 ECH