Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g03039 ATGGAATCAGTAGTTGAAAACGTTGTGATTGTGGGAGCTGGAATCGCTGGGCTTGCAACATCCTTGGCACTTCACAGGTTGGGTGTGAGAAGTTCGGTGTTAGAATATTCAGATAGTTTAAGGGTGTCTGGCTTTGCTTTAACAACATGGACAAATGCTTGGAAAGCCTTGGATGCTCTTGGCGTGGGAGACATTCTTCGTCACCAACATCTCCAGCTAAAACAGAATGTGACTACATCTTTGAGTATGGGGCAGCAAACATCAAGCTTGAGCCTCACAGCCACAGGAAAACATGGAGACTATGAAGTTCGATGCGTTCGAAGACAATTAATGCTAGAAGCACTTGCAAAGGAACTTCCAAGTGGGACCATTAGGTTCTCGTCAAAGGTTGTTGCAATTCAAGAATCTGGCTTCTTCAAGATACTCCATCTTGCTGATGGAACCACCATCAAAACCAAGGTGTTGATTGGGTGTGATGGAATAAACTCTGCTGTGGCGAAGTGGCTGGGCTTCAAGGAGGCATCTTTTACAGGGAGATTCGTGATCAGGGGTAACATAAAGTTGATGAACAATCATGGCCTTCAGCACAATTTCATGCACTTCTTTGGAAAAGGCTTTCGATTCGGTATTATGCCTTGTGATGACAAAATTGTTTACTGGTTTTTTACATGGACTCCCACCATTGAAGAGAAGGAGCTAGTGAACTACCCAGAAAAAATGAAGCAATTGGTGTTGAACAAGTTTGAGAAGATGCCAAGAGATATTAAATGCTTTATAGAGAAAACACAAGCAGAAGATATCTTAACATCTCCATTGAGATACAGACACCATTGGGAGCTTATGGTAGGAAATATCAGCAAGGGCAATGTTTGTGTTGTTGGAGATGCTTTTCACCCCATGGCCCCTGACCTAGGTCAAGGTGCATGTTGTTCCTTGGAAGATGGGATTGTTTTAGGCAGGTACCTGGCTCAGGCATTCTCCAAAAATTCTACCAAAGATGTTAAGGAGATAGAGGAAAAGGGTGAGGGTGAGACTGAGGAGCAGTACAAGGAAATCGAGGCTAGCTTGAGGAAATATGCAAAAGAGAGAAGATGGAGAAACATTGATATCAGTGTTACATCTTATGTTCTGGGGCTTGTTCTGCAAGGTGATTTGAAATTGGTGGCACATGTGAGGGACAAAGTTTTGCCTCATTTCCTAGCTGGGTTGCTGTTGAAGAAGTCAGATTTTGATTGTGGAAAACTCAAAACCTCTGATGAAGAGTCTGTGGCAAATTCTTCTTCCTCATCATCGTCGTCTTCATCTGATTACCCAAACCTGCTCGTGTTTTATGCAAGCTGCCTTAGGATGGGAGTTCAACGGCATGAAGCGCTTGCTGAAGACGAGCCTGCTGAAAATGTTTGTGCTAGTAGTTCTTTGAAGCAAGGTGCTCTTCCCAGTGAGTCTGCCAATAGCAATCCATGTGTAAATACGGAAAGTAGTGAAGTTAATGAATCGGGTGACATTTCTTTTAAGAAAAGCAATCCATCACATATCTATAGACAAGATGTTGTGAAAAATAATACCAGTGGCATGATTGGGATTGTGACAGAAGTCGCGGGTGATTCAGATTCAGATTCAGATAGTAGCATCACTGATGATGAGAATGATAGTGAGGATGAGGATGGTGATGGTGAGGAAGGCGATGATAGTAATAATGCTAGCAGGAACTCTGAAAGTAATGTTTCTGCTGGGCATGGTAAAACCGATGCACTTCTGGCTGACCAGCTGCGTGTACTGTGGATGGACGAATCTGAATCCGCTCAAAATTTCAGTGACGTTGAAGTTGTTGATCGTGGATTTTTACATGGTGATTTTGTTGCTGCGGCTTCAGACCCTACTGGGCAAGTGGGTGTGGTGGTTGATGTCAATATATGTGCGGATCTGTTGTCCCATGATGGATCTATAATAAAAGATGTCTCGTCAAAAAACATAAGGCGTATTAGGGATTTCACTGTTGGTGATTATGTGGTGCTTGGGCCCTGGCTAGGCAGAGTCGATGATGTTTTGGATAATGTAACTGTCTTATTTGATGATGGTTCAGTTTGTAAAGTTTCGAAAGCAGATCCATTGAATCTTAAACCAATTTCTAAGAATATTCTTGAAGATGGGCTTTTTCCCTATTACCCAGGGCAACGGGTAAGGGCTAGCTCCTCATCAGTTTTCAAGAATTCAAGATGGCTGTCTGGCCTGTGGAAAGCTAATAGGTTAGAAGGTACGGTAACTAAAGTTACAGTTGGATCAGTGTTTGTTTATTGGATAGCATCTGCAGGTTATGGGCCATATTCTTCTACTGCCCCAGCAGAGGAGCAGAGCCCAAAAAACTTAAAATTGCTGTCTTGTTTTTCTCATGCAAATTGGCAATTGGGTGACTGGTGTCTATTACCCTCATCAGTACTGTCATCCTCAGCTTCCATGGACAAAGGCATATCAAAATTGGAACTTAACGATTCTGCTAACAATGAATTAGATTCTAATCAGACTGGAAGTGGGTGTGATTCAGAAGCTACTGTTGAGGAAATAAATGAGAATAAGGATACTATGGACCTTGATCCAGCTGATACTTTGGAAGGGAATGACGGACATGAGAAAAGTAATCCTTCACGTGATTCTAGCTCATGCTGCAGTTCTATCTCTGTATCAAAGGAACCTGTCCATGAAGCTTGGCCTCTTCACCGCAAGAAAATTAGGAAAGTTGTCATCAGGAAAGAAAAAAGGGCCCGAAAGAAAGAAGAAAGTTTCGAGAAAGCTCTTTTGATTGCCAACACAAGAACAAAAGTTGATGTTGCATGGCAGGATGGAACAATAGGGCATGAACTGAATTCTACAAGTTTAATTCCTATAGATAATCCTGGTGACCATGAATTCGTTTCAGAACAATATGTGGTAGAGAAGACCTCCGATGTTGGTGAGGATATTTCTGAAGCCAGGCGAGTCGGGGTTGTGATAAGTGTTAATGCAAAGGAGCGGACAGCTTGCGTGAGGTGGTTAAAAAATGTTGCTAGAGCAGAAGATCCTCGAGAGTTTGACAATGAGGAAGTTGTAAGTGTGTATGAGCTAGAGGGCCATCCAGATTATGATTACTGCTATGGGGATGTGGTTGTTCGCCTGACACCTGTGTCTGCACATTTAGAAACATCTTCTGTTGTAGAGTCCACTGAGAAATCAGAGCAGAAAACTGAAGAGTGTGGGATTAAAAAGGAAGCAAAAATCCAAACTGATACTAATAGAGTAGAAAATGCATCTAGTGATACTTCTGTGCAATTTTCTGACCTCTCTTGGGTTGGAAATATAACTGGCCTTAAGAATGGTGATATTGAAGTCACTTGGGCTGATGGAATGGTGTCAACGGTTGGACCCCAAGCAATCTATGTGGTTGGTCGAGACGATGATGATGAATCAATTGCTGCTGGGAGTGAAACAAGTGATGCTGCAAGCTGGGAAACTGTTAATGATGATGAAATGGAAGTCCTTGAGGATTCTAGAGAGGATATTGAGAGGGAAAATTCAAGCAGTGTTACTTCTGAGACAGAAGAAAGTGGAGAGAATGATTTTGGTAGGGCTGCTGCACTTTCTGTTCCCCTAGCAGCATTTCGGTTTGTCACTAGACTTGCCAGTGGAATATTCTCAAGGGGCCCAAAGAACTCGGATTCTATTGACATGCAGATAAAAGCTGGGGATGCAAATTCATCACTAGTTGTTGATGATGAGTCTAGTTCGCAGGGACTTATTCCAATTGATGGTGATACTTCAGGCAATAAGAATGGAAGATACAAGGAGGTTGTGTTGGAAGCAACTGAAAATCTGGAAGCATGTGAGGCACTCTATGGCTTGAAAAATGAAGATGCTCTTGAAAGTTGTGATAGTGGGAGTTGCAGTTTGAAACATTTTGACATAACTCAAGATCCATCAGACCACTATTTTATTGGTGCAAATGGACAGAGTAGCAACCGGAAATGGTTAAAGAAAGTGCAACAAGATTGGAACATACTGCAGAATAACCTTCCTGAGGAAATCTATGTACGAGTTTACGAAGATAGAATGGATCTCTTGAGAGCAGTTATTGTAGGGCCATACGGAACCCCTTACCAAGATGGACTCTTTTTCTTTGATTTTCACCTTCCGCCAGAATACCCTGATGTTCCACCGTCTGCATACTATCATTCTGGTGGTTGGCGAATTAACCCTAACTTGTATGAGGAAGGGAAGGTTTGCCTTAGCCTTCTAAATACATGGACAGGCAGAGGAAATGAAGTATGGGATCCAAAATCCTCTAGCATACTTCAAGTCCTAGTTTCACTTCAAGGTTTAGTACTCAATTCTAAGCCTTACTTCAATGAAGCTGGGTATGATAAGCAGATTGGGACAGCCGAAGGAGAGAAGAATTCATTGTCATATAATGAGAATACCTTTTTACTTAACTGCAAGACTATGATGTATCTTATGAGGAAACCCCCCAAGGATTTTGAAGTGCTCGTCAAAGAACATTTTAGGAGGCGGGGCCATAACATCCTTAAGGCTTGTGATGCATATATGAAAGGTTGCTTGATTGGCTCGTTGACTAGAGATGCCTCCGTTAGTGAAAAAAGCGGTCAGAATTCAACCTCTGTGGGTTTCAAGTTGATGTTAGCCAAGATAGTGCCAAAGCTTTTCCTGTCACTTAGTGAGGTTGGAGCTGATTCCGAGGAATTTAGGCATCTCAAAGATTTGTAG 4752 0.4228 MESVVENVVIVGAGIAGLATSLALHRLGVRSSVLEYSDSLRVSGFALTTWTNAWKALDALGVGDILRHQHLQLKQNVTTSLSMGQQTSSLSLTATGKHGDYEVRCVRRQLMLEALAKELPSGTIRFSSKVVAIQESGFFKILHLADGTTIKTKVLIGCDGINSAVAKWLGFKEASFTGRFVIRGNIKLMNNHGLQHNFMHFFGKGFRFGIMPCDDKIVYWFFTWTPTIEEKELVNYPEKMKQLVLNKFEKMPRDIKCFIEKTQAEDILTSPLRYRHHWELMVGNISKGNVCVVGDAFHPMAPDLGQGACCSLEDGIVLGRYLAQAFSKNSTKDVKEIEEKGEGETEEQYKEIEASLRKYAKERRWRNIDISVTSYVLGLVLQGDLKLVAHVRDKVLPHFLAGLLLKKSDFDCGKLKTSDEESVANSSSSSSSSSSDYPNLLVFYASCLRMGVQRHEALAEDEPAENVCASSSLKQGALPSESANSNPCVNTESSEVNESGDISFKKSNPSHIYRQDVVKNNTSGMIGIVTEVAGDSDSDSDSSITDDENDSEDEDGDGEEGDDSNNASRNSESNVSAGHGKTDALLADQLRVLWMDESESAQNFSDVEVVDRGFLHGDFVAAASDPTGQVGVVVDVNICADLLSHDGSIIKDVSSKNIRRIRDFTVGDYVVLGPWLGRVDDVLDNVTVLFDDGSVCKVSKADPLNLKPISKNILEDGLFPYYPGQRVRASSSSVFKNSRWLSGLWKANRLEGTVTKVTVGSVFVYWIASAGYGPYSSTAPAEEQSPKNLKLLSCFSHANWQLGDWCLLPSSVLSSSASMDKGISKLELNDSANNELDSNQTGSGCDSEATVEEINENKDTMDLDPADTLEGNDGHEKSNPSRDSSSCCSSISVSKEPVHEAWPLHRKKIRKVVIRKEKRARKKEESFEKALLIANTRTKVDVAWQDGTIGHELNSTSLIPIDNPGDHEFVSEQYVVEKTSDVGEDISEARRVGVVISVNAKERTACVRWLKNVARAEDPREFDNEEVVSVYELEGHPDYDYCYGDVVVRLTPVSAHLETSSVVESTEKSEQKTEECGIKKEAKIQTDTNRVENASSDTSVQFSDLSWVGNITGLKNGDIEVTWADGMVSTVGPQAIYVVGRDDDDESIAAGSETSDAASWETVNDDEMEVLEDSREDIERENSSSVTSETEESGENDFGRAAALSVPLAAFRFVTRLASGIFSRGPKNSDSIDMQIKAGDANSSLVVDDESSSQGLIPIDGDTSGNKNGRYKEVVLEATENLEACEALYGLKNEDALESCDSGSCSLKHFDITQDPSDHYFIGANGQSSNRKWLKKVQQDWNILQNNLPEEIYVRVYEDRMDLLRAVIVGPYGTPYQDGLFFFDFHLPPEYPDVPPSAYYHSGGWRINPNLYEEGKVCLSLLNTWTGRGNEVWDPKSSSILQVLVSLQGLVLNSKPYFNEAGYDKQIGTAEGEKNSLSYNENTFLLNCKTMMYLMRKPPKDFEVLVKEHFRRRGHNILKACDAYMKGCLIGSLTRDASVSEKSGQNSTSVGFKLMLAKIVPKLFLSLSEVGADSEEFRHLKDL 1583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g03039 1583 Gene3D Ubiquitin Conjugating Enzyme 1301 1563 IPR016135 -
Phco6g03039 1583 SUPERFAMILY UBC-like 1313 1499 IPR016135 -
Phco6g03039 1583 MobiDBLite consensus disorder prediction 540 561 - -
Phco6g03039 1583 Pfam Ubiquitin-conjugating enzyme 1337 1481 IPR000608 -
Phco6g03039 1583 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 531 1573 - -
Phco6g03039 1583 MobiDBLite consensus disorder prediction 1172 1198 - -
Phco6g03039 1583 MobiDBLite consensus disorder prediction 476 507 - -
Phco6g03039 1583 FunFam Probable ubiquitin-conjugating enzyme E2 23 1298 1571 - -
Phco6g03039 1583 Coils Coil 342 362 - -
Phco6g03039 1583 Pfam FAD binding domain 7 327 IPR002938 GO:0071949
Phco6g03039 1583 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 1332 1492 IPR000608 -
Phco6g03039 1583 SMART ubc_7 1335 1492 - -
Phco6g03039 1583 MobiDBLite consensus disorder prediction 531 580 - -
Phco6g03039 1583 CDD UBCc 1335 1485 IPR000608 -
Phco6g03039 1583 Gene3D - 7 375 IPR036188 -
Phco6g03039 1583 MobiDBLite consensus disorder prediction 856 890 - -
Phco6g03039 1583 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 302 318 - -
Phco6g03039 1583 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 287 302 - -
Phco6g03039 1583 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 - -
Phco6g03039 1583 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 - -
Phco6g03039 1583 MobiDBLite consensus disorder prediction 856 880 - -
Phco6g03039 1583 SUPERFAMILY FAD/NAD(P)-binding domain 7 405 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g03039 Phco-Chr6 51448119 51459956 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g03039 6 51448119 51459956 Phco6g03039 6 51448119 51459956 ECH