Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g03017 ATGAAGGCTAGTAGGAGAAGCAAATTAAGCTCAAAAGCGGAACCCTCTGCTGCAGTGCGGGGCAGTCACAGCATTCGCAGATCGAATAGGAGTAATTTCACCAAATCTTTTCGGAGATGTTTCTCACAAGGACTGAGTATGACAGAGGAGTCAACACCTTTTCTCCTGAAGGCCGTTTGTTTCAGGTTGAATATGCAATTGAAGCCATCAAGAAAGAAAAGGCTGGGATCAACTGCAATTGGGTTGAAGACTAAAGAGGGTGTTGTCCTTGCAGTTGAAAAGCGCATAACTTCTCCACTGCTGGAGCCAAGTAGTGTTGAGAAAATTATGGAAATTGATGAGCACATAGGCTGTGCAATGAGTGGATTGATTGCTGATGCTCGAACACTTGTTGAGCATGCACGGGTGGAAACTCAGAATCATAGGTTCTCCTACGGTGAGCCAATGACTGTTGAGTCCACAACCCAAGCTCTTTGTGATCTTGCCTTGCGTTTTGGTGAAGGTGATGAAGAATCCATGTCTCGACCATTTGGAGTATCTCTTCTCATTGCTGGCCATGATGAGAATGGGCCTAGCTTATATTACACTGATCCATCTGGCACATTTTGGCAATGCAATGGAAAAGCAATTGGTTCAGGGTCGGAAGGTGCAGACAGTTCTCTGCAAGAACAATTCAACAAGGACCTGACTCTTCAGGAAGCCGAGACTATTGCTTTATCCATTTTGAAGCAAGTTATGGAAGAGAAGGTTACTCCCAACAACGTTGACATTGCCAAGGTGGCTCCAACATATCATCTTTATACCCCCTCCGAGGTGGAAGCTGTGATAAGTCGTCTATGA 840 0.4512 MKASRRSKLSSKAEPSAAVRGSHSIRRSNRSNFTKSFRRCFSQGLSMTEESTPFLLKAVCFRLNMQLKPSRKKRLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNGKAIGSGSEGADSSLQEQFNKDLTLQEAETIALSILKQVMEEKVTPNNVDIAKVAPTYHLYTPSEVEAVISRL 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g03017 279 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 67 279 IPR029055 -
Phco6g03017 279 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 75 276 IPR029055 -
Phco6g03017 279 CDD proteasome_alpha_type_5 74 260 IPR033812 GO:0019773|GO:0043161
Phco6g03017 279 FunFam Proteasome subunit alpha type 61 279 - -
Phco6g03017 279 Pfam Proteasome subunit 75 260 IPR001353 GO:0005839|GO:0051603
Phco6g03017 279 ProSiteProfiles Proteasome alpha-type subunit profile. 62 276 IPR023332 -
Phco6g03017 279 MobiDBLite consensus disorder prediction 1 25 - -
Phco6g03017 279 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 75 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g03017 Phco-Chr6 51266973 51273359 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g03017 6 51266973 51273359 Phco6g03017 6 51266973 51273359 ECH