Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02958 ATGCGTTCTTCTCATACTCTCCTATCTCTTCTCTCTCTCTCTTCCCTTCTTCTTACTTGCTTTCTGTATGTAGTTGCAGAAGAACCAAACCTTTCTAACAAAATTGGCCAAGGCTACCGTCTCGTATCCATTAAAAAAGCCCCTGATGGTACCCTTGTTGGCCTCCTCCAAGTTAAGCAGAAGAACATTATCTATGGCCCTGACATTCCCCTTTTACGATTACATGTGAAGCACGAGACTGAGAACCGTTTGAGGGTACACATCACTGACGCAGAGAAACAAAGGTGGGAGGTTCCTTACAACCTTTTGCCGAGGGAGCAACCACTGCGTGTGAAACAAAACGCTGAGTGGTCGTGGAGGAAGAAGAAGAACCTAATATCACTGTCAAATAACACTACCTATAGCTCTGAGCTTGTGTTCAGCTACACTTCAGACCCGTTTAGTTTTGCAGTGAAAAGAAAGTCAAATGGGGATACTCTTTTTGACTCCAGTTCCAATGAGTTTAACACATTGGTCTTCAAGGACCAATACTTGGAAATTTCTACCAAATTGCCCAAAGATGTTTCTCTGTATGGTTTGGGGGAGAACACACAGCCACACGGGATGAAGCTGTACCCAAGTGACCCTTACACTTTGTATACCACTGATGTCTCAGCCATTAATCTCAACACTGATTTATACAGCGCACACCCTGTGTACATGGATCTCAGAAATGAAGGTGACAAGCCTTATGCACATGGAGTTCTGTTGCTGAATAGCAATGCAATGGATGTGTTCTATAGAGGAACCTCTTTGACCTACAAGGTTATTGGAGGAGTGTTTGATTTTTACTTCTTTGCTGGACCCACGCCTCTGAATGTTGTGGATCAGTACACTTCCTTGATTGGTAGACCAGCTCCAATGCCTTACTGGGCCTTTGGATTCCACCAATGCAGATGGGGCTATCATAATCTATCTGTAGTAGAAGATGTGGTCGACAACTACAAGAAGGCTAAAATCCCACTCGATGTGATATGGAATGATGATGATCACATGGATGGCCACAAGGACTTCACACTCAATCCAACTAACTACCCTCATTCCAAGCTTTTAGACTTCCTGGACAAAATACACAGCATTGGCATGAAATACATTGTAATCGTTGATCCAGGAATTGCTGTTAACTCCAGTTATGGTGTATATCAAAGGGGTATGGCTACTGATGTTTTTATCAAGTATGAAGGTGAACCCTTCTTGGCTCAAGTTTGGCCAGGAGCAGTAAATTTTCCTGATTTTCTCAATCCAAAAACAGTTTCATGGTGGGTTGATGAGATCCGTCGCTTCCATGAACTAGTCCCTATTGATGGCCTATGGATTGACATGAATGAAGCTTCAAATTTCTGCTCGGGAAAGTGCACAATTCCTGAGGGAAAAGTGTGCCCAAGTGGAACAGGACCTGGTTGGATTTGTTGCTTAGATTGCAAAAACATCACGAGCACAAGGTGGGATGAACCTCCCTACAAAATTAACGCTTCAGGAGTACAGGCTCCTATAGGCTTCAAAACTATAGCCACTAGTGCAGTTCACTATAATGGTATTTTGGAGTATGATGCTCACAGCATCTATGGTTTCTCTCAATCAATTGCAACTCACAAGGCTCTTCAGGGGCTTCAAGGAAAAAGGCCTTTCATATTGTCCCGCTCCACTTATGTGGGTTCAGGCAAATATGTCGCACATTGGACTGGTGACAATAAGGGCACATGGGAGGACTTAAGGTACTCAATATCCACAATGCTCAATTTTGGAATATTTGGGGTGCCAATGGTTGGTTCAGACATATGTGGTTTCTATCCAGCTCCCACGGAAGAGCTTTGCAATCGATGGATTGAAGTTGGTGCCTTCTACCCTTTCTCAAGAGACCATGCAAACTACTACTCCCCAAGACAGGAGCTTTACCAATGGGAATCAGTAGCTGAGTCTGCTAGAAATGCTTTAGGTATGAGGTATAAGCTCCTCCCTTATCTGTACACCTTGAACTATGAGGCACATAATAGTGGAGCACCAATCGCAAGGCCTCTTTTCTTCTCATTTCCAAGTTACATTGAATGTTATGACCTCAACGCGCAGTTCTTACTAGGGAGCAGTCTAATGATTTCTCCTGTGCTAGAACAAGGAAAAACGCAAGTTAAAGCCCTTTTCCCTCCTGGAACCTGGTACAGTTTGTTTGATTTGACACAGACAATTGTATCTAAAGATGGGAACTATGTTACCCTTGATGCACCTCTGCATGTGGTCAATGTGCATGTGTATCAGAATACCATTCTTCCAATGCAACAGGGTGGAATGATATCTAAGGATGCTAGAATGACACCCTTCAGCCTCATTGTGACCTTCCCGGCTGGTGCAACTGATGGAGTAGCCAAAGGGGAGCTTTTCCTTGACGATGATGAGCTTCCAGAAATGAAACTTGGAAGTGGCTTTTCAACCTACATTGATTTCCATGCAACTGTGAAAGAAGGAAACGTGAATGTTTGGTCAGAAGTCCAAGAGGGCCAGTTTGCTCTAGATAAAGGTTGGGTTATTGACACAATAAAAGTGTTGGGATTAAACAGAAATGGAACACTAACTAAAATTGAGATTGCTGGAGAAAAACAGATGGACATCTTAAATGTGGAAGTTAGTACAAGTCAACATAGTTACTTATTTGGACAGGGAGATGGAGATAAGATACTGATGGTAGGATTGAAGAGATTGAATATTCCTCTAGGTAAAAATTTTGCTGTCACCTGGAAGATGGGATCATAA 2784 0.4292 MRSSHTLLSLLSLSSLLLTCFLYVVAEEPNLSNKIGQGYRLVSIKKAPDGTLVGLLQVKQKNIIYGPDIPLLRLHVKHETENRLRVHITDAEKQRWEVPYNLLPREQPLRVKQNAEWSWRKKKNLISLSNNTTYSSELVFSYTSDPFSFAVKRKSNGDTLFDSSSNEFNTLVFKDQYLEISTKLPKDVSLYGLGENTQPHGMKLYPSDPYTLYTTDVSAINLNTDLYSAHPVYMDLRNEGDKPYAHGVLLLNSNAMDVFYRGTSLTYKVIGGVFDFYFFAGPTPLNVVDQYTSLIGRPAPMPYWAFGFHQCRWGYHNLSVVEDVVDNYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPHSKLLDFLDKIHSIGMKYIVIVDPGIAVNSSYGVYQRGMATDVFIKYEGEPFLAQVWPGAVNFPDFLNPKTVSWWVDEIRRFHELVPIDGLWIDMNEASNFCSGKCTIPEGKVCPSGTGPGWICCLDCKNITSTRWDEPPYKINASGVQAPIGFKTIATSAVHYNGILEYDAHSIYGFSQSIATHKALQGLQGKRPFILSRSTYVGSGKYVAHWTGDNKGTWEDLRYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWESVAESARNALGMRYKLLPYLYTLNYEAHNSGAPIARPLFFSFPSYIECYDLNAQFLLGSSLMISPVLEQGKTQVKALFPPGTWYSLFDLTQTIVSKDGNYVTLDAPLHVVNVHVYQNTILPMQQGGMISKDARMTPFSLIVTFPAGATDGVAKGELFLDDDELPEMKLGSGFSTYIDFHATVKEGNVNVWSEVQEGQFALDKGWVIDTIKVLGLNRNGTLTKIEIAGEKQMDILNVEVSTSQHSYLFGQGDGDKILMVGLKRLNIPLGKNFAVTWKMGS 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02958 927 FunFam Maltase-glucoamylase, intestinal 298 663 - -
Phco6g02958 927 Pfam N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase 55 186 IPR031727 -
Phco6g02958 927 SUPERFAMILY Galactose mutarotase-like 36 284 IPR011013 GO:0003824|GO:0005975|GO:0030246
Phco6g02958 927 Pfam Glycosyl hydrolases family 31 277 768 IPR000322 GO:0004553|GO:0005975
Phco6g02958 927 Gene3D Glycosidases 298 663 - -
Phco6g02958 927 PANTHER ALPHA-GLUCOSIDASE 54 875 - -
Phco6g02958 927 CDD GH31_N 178 296 - -
Phco6g02958 927 Pfam Galactose mutarotase-like 189 257 IPR025887 -
Phco6g02958 927 SUPERFAMILY (Trans)glycosidases 287 679 IPR017853 -
Phco6g02958 927 SUPERFAMILY Glycosyl hydrolase domain 681 762 - -
Phco6g02958 927 Gene3D - 766 927 IPR013780 -
Phco6g02958 927 CDD GH31_MGAM_SI_GAA 296 676 - -
Phco6g02958 927 Gene3D glycosyl hydrolase (family 31) 32 297 - -
Phco6g02958 927 FunFam Alpha-glucosidase 1 664 764 - -
Phco6g02958 927 ProSitePatterns Glycosyl hydrolases family 31 active site. 449 456 IPR030458 -
Phco6g02958 927 Gene3D - 664 763 IPR013780 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02958 Phco-Chr6 50766922 50770870 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02958 6 50766922 50770870 Phco6g02958 6 50766922 50770870 ECH