Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02795 ATGGAGCCCAAGGACGAATTTGAACTCCACCATTTCACTGCACCCACAGGGACCACTTTCTCTCAGTTACTATTCGGAGATGACCATGACCATGACCATGACCGTGACCTTGACCACCACGATGCAACTGCATTGCCTCTACCTCAGGACCACTACTCTTACAATCACAACAACCTTTCCCGGTCGCCACTTTTCTCCTTTCACAAGCCACCCAAAATGTTATGCTTTGGAAACCATCAAAACCAACCCAACCTTTCGCTTCCTCCAAACACCGTCACCCCTCAGAAATCTGTCATCACTTCCAGTGATTCCTCTTCTGCTTCCTCCTCCAACTACACCAACACCGGCTTCAATTCCCTACCCAAGTCCACTAGTTTGCAGAAAAAGCGGAATGGGTTGGGACAAGAGCCAGTGACCAAGGTTGGTGTTGGAGGCCAAAGACAAACTAAGAAGACCAAAGCAGAGAACCCCACCTCAACCGGACATGCAAAGAGGAAGGAGAAGCTCGGGGAACGAATCGCAGCGTTACAACAGCTTGTTTCTCCCTTCGGCAAGACAGATACAGCCTCAGTGCTTCACGAGGCCATGGGTTATATAAGATTTCTTCATGACCAAGTTCAGGTCCTGTGCTCTCCTTACTTGCAAACTTTGTCTTCCTCACACCACCAACACCAGCACGGGGACGGAGAAAACAATGAAGAGGAAGTGAAGAAGGAGTTGAGGAGTAGGGGTCTGTGCTTGATCCCTGTGGGATGCACCGTACACGTGGCGAGTAGCAACGGTGCTGATTTTTGGTCACCTGGTGCAATAGGGAACAAGGTTTCACCATCAAGCAAGTAG 840 0.4976 MEPKDEFELHHFTAPTGTTFSQLLFGDDHDHDHDRDLDHHDATALPLPQDHYSYNHNNLSRSPLFSFHKPPKMLCFGNHQNQPNLSLPPNTVTPQKSVITSSDSSSASSSNYTNTGFNSLPKSTSLQKKRNGLGQEPVTKVGVGGQRQTKKTKAENPTSTGHAKRKEKLGERIAALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCSPYLQTLSSSHHQHQHGDGENNEEEVKKELRSRGLCLIPVGCTVHVASSNGADFWSPGAIGNKVSPSSK 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02795 279 FunFam Transcription factor bHLH113 146 216 - -
Phco6g02795 279 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 153 202 IPR011598 GO:0046983
Phco6g02795 279 MobiDBLite consensus disorder prediction 76 167 - -
Phco6g02795 279 MobiDBLite consensus disorder prediction 77 132 - -
Phco6g02795 279 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 164 215 IPR036638 GO:0046983
Phco6g02795 279 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 58 255 - -
Phco6g02795 279 CDD bHLH_AtbHLH_like 164 209 IPR045239 -
Phco6g02795 279 Gene3D - 146 241 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02795 Phco-Chr6 49236866 49238624 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02795 6 49236866 49238624 Phco6g02795 6 49236866 49238624 ECH