Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02782 ATGACCATCGACATCCAGAGCTTGGAAGACAGGTATATTGATTCTTGCAGGAGACAGGGTGTTTTGCCTAATTCTTCTATTTTGTCAAGTCTTTTCAAGGCTGAGGTCAAAAAGTCCAATCATGATCTGTGCAAGCTGGAGATTTTAATTGATGACCTAAAGGATGTCGATATTGCTCCACTTCTTGACTTGTGCATGAACTTTGATGCTTCTGAAATAGAAGCTGTTGATGTACGTAATGAATCATCGTGTGTATTAAATGGAGAATATGCATTATCATTGATGCGTGCTGTCAATAAAAAGCTTCGAGTAGTCCATCTACAGGATCTTTCATATGGAAAAGACTTCTTACGGGATATTTCACAAAGAGGTTTGGCATGCCAAGTTTTGACATTGAGGTGCTCACGTTTCCGGAAGCTGAACTTAACGGGGGAGTTCATGCATATGCATACCCTAAATCTTGATTTCAGTTCTTCCCTTACCAGTTTCCAGGAGGATTGTTTTAATTGTATGCCCAATCTAACGCGTCTCTCAATGTGTGATACAAGGATTACAAATCTTTGGACAACTGTTGCAGCTCTCTCTAAGCTTCCTTCTTTAATTGAATTAAGGTTTCAATATTGGCAGTATTGCAATGATGCTGGAACATCTTTTATCTCATGCAGTGGGAAGTCTGATGACACTACTGATTTTAGCCTGCTTGATAGAATTCCTTTTATTGGTGAACCCTTCACCAGTACAACTGAACTGACAGATCCCAACTTTAATTCTGAAGATCCACTAAGAAATTTTTATTCCTTGGATGAAGAAATTATAAATCATGAGGATTCGTCAGATGACAGTGAAGTTGACTTTACTAGTCGTCATCATAGATACTGGTTGTCAGATGTTTTTCCTGGGTGGAGTTCTGAAGTGCCTCTTCTTCATGAGAATGAAGATGAAGAAGATTCATCGCAAGGCACTTTTATGGAACCTATTGCTGATGTTTCTATGAAGTATATGTCTCGTCATGCATCGCCAATATGCTATGAGAAGCATTACAGGGAGTTCATGATTGCTTCATTGCCAAATCTGAAAAATTTAGATAATATGCCTATCAGAAAGATTGACAAGGAAAGGGCTACTGGAATATTTTCTCAATACTTTGAATATCTTCCGTATAAATGGAAGCACAAAGAGAGTGTTGTAAGTATCTTACAGAAGAGAGAAATAAAATCAGGCCATAATAAGGTGCACTCTTCCAAGAATAGGACATCGTATCCTCCTGGACAATCACAATATTTTTATACTAGGTCTCTTTCTGCTGCTAAATTGGGGTCCTCAACTTGGCCTTTCTTGCATCCCCTTTCTCTATTAGGATGTGAATTGGACAAGGGCTTTCATCCAAGGCAGTTTGAGTACCATCCATCTGACTCAAGTTTGATGGTCTTTGGAACTTTAGATGGTGAAGTAGTTGTCATCAACCATGAGAATGAACATATTGTTAGTTATATTCCATCACTTGGAGCAATGAATAGTGTTTTAGGTCTCTGTTGGCTAAAAAAATATCCCTCTAAGCTTATAGCAGGATCAGACAATGGTTCCTTGAAATTGTATGACATCCACCACATACCAAGAAAAGTTACTGGCATACATGGGAATTTTGGTTGTGTTACGTTTGATGAATTTGACCAGTTGACATCTGTTCATGTTAACTCTACGGATGAACTATTTCTTGCAAGTGGTTATTCAAGAAATGTTGCTTTATATGACATCAACAGTGGGAAACGTTTACAAGTGTTCACAGATATGCATCGTGGGCATATTAATGTAGTCAAGTTTGCTAATCATTCCCCATCAATTTTTGCCACTTCATCATTTGATCACGATGTGAAGATGTGGGACTTGAGACAAAAGCCAATACACCCATGCTTTACAGTTTCAAGCTCCAGAGGTAATGTGATGGTTTGCTTTTCTCCAGATGATCAATATATTCTTGCTTCAGCGGTTGATAATGAGGTTAGACAATATCTGGCTGTTGATGGTAGGCTTCACTTAGTTTTTGATATAGCTCCCACTGAAAGTTCTCAAAATTACACCCGTTCTTATTACATGAATGGGAGAGACTACATCATAAGTGGGAGTTGTGACGAGCACGTCCGTATTTGCTGTGCTCAAACGGGGAGGCGCTTGAGAGATATATCCCTTGAGGGAAGAAACTTAGGAAGTTCTGTCTTTGTTCAGTCTTTGAGGGGTGATCCTTTCCGGGATTTCAATATGAGCGTGTTAGCAGCTTACATGCGGCCAGGCTCCAAGTCTAAAATTGTCAAGATCAACTTACTAGCATCTAGTGGCCATGCCAACAAGGATGATTCTGATGATTTGCGCCCTTGTCCATTTCACAGTATGGGAGCTTGA 2397 0.3934 MTIDIQSLEDRYIDSCRRQGVLPNSSILSSLFKAEVKKSNHDLCKLEILIDDLKDVDIAPLLDLCMNFDASEIEAVDVRNESSCVLNGEYALSLMRAVNKKLRVVHLQDLSYGKDFLRDISQRGLACQVLTLRCSRFRKLNLTGEFMHMHTLNLDFSSSLTSFQEDCFNCMPNLTRLSMCDTRITNLWTTVAALSKLPSLIELRFQYWQYCNDAGTSFISCSGKSDDTTDFSLLDRIPFIGEPFTSTTELTDPNFNSEDPLRNFYSLDEEIINHEDSSDDSEVDFTSRHHRYWLSDVFPGWSSEVPLLHENEDEEDSSQGTFMEPIADVSMKYMSRHASPICYEKHYREFMIASLPNLKNLDNMPIRKIDKERATGIFSQYFEYLPYKWKHKESVVSILQKREIKSGHNKVHSSKNRTSYPPGQSQYFYTRSLSAAKLGSSTWPFLHPLSLLGCELDKGFHPRQFEYHPSDSSLMVFGTLDGEVVVINHENEHIVSYIPSLGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIHHIPRKVTGIHGNFGCVTFDEFDQLTSVHVNSTDELFLASGYSRNVALYDINSGKRLQVFTDMHRGHINVVKFANHSPSIFATSSFDHDVKMWDLRQKPIHPCFTVSSSRGNVMVCFSPDDQYILASAVDNEVRQYLAVDGRLHLVFDIAPTESSQNYTRSYYMNGRDYIISGSCDEHVRICCAQTGRRLRDISLEGRNLGSSVFVQSLRGDPFRDFNMSVLAAYMRPGSKSKIVKINLLASSGHANKDDSDDLRPCPFHSMGA 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02782 798 PANTHER BNAC09G30780D PROTEIN 2 797 IPR046377 GO:0071493|GO:0080008
Phco6g02782 798 Gene3D Ribonuclease Inhibitor 99 377 IPR032675 -
Phco6g02782 798 SUPERFAMILY WD40 repeat-like 461 727 IPR036322 GO:0005515
Phco6g02782 798 SMART LRRcap_2 344 362 IPR003603 -
Phco6g02782 798 Pfam WD domain, G-beta repeat 599 628 IPR001680 GO:0005515
Phco6g02782 798 SUPERFAMILY L domain-like 126 221 - -
Phco6g02782 798 SMART WD40_4 587 628 IPR001680 GO:0005515
Phco6g02782 798 SMART WD40_4 633 671 IPR001680 GO:0005515
Phco6g02782 798 SMART WD40_4 549 584 IPR001680 GO:0005515
Phco6g02782 798 SMART WD40_4 491 533 IPR001680 GO:0005515
Phco6g02782 798 ProSiteProfiles Trp-Asp (WD) repeats profile. 595 630 IPR001680 GO:0005515
Phco6g02782 798 Gene3D - 461 746 IPR015943 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02782 6 49153099 49160623 Phco6g02782 6 49153099 49160623 ECH