Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02778 ATGACGAGCGCTTCGGAGCTATTCCACACCAGAAGACATCGATTGGGACGAAATTCTCTCGATCTAGGGTTCGACACAGAACTCCAAGCCGCCGATTCTTTCCGCCGTCACTACCACGTCCGCCGCCTCCGTCACCACCCGGAGCGTGCATCTGATAGAATCAGTGGGAGGTATCGGCGGACTTTCGTAAGTGATACCGTTGATTCTGAAGAAAATGTAAGAGGCGGTCTTGCAGGGAGTGCCAGTGAGAGACTACCAGTGGGTGTGATTCTTGCACGGACCAGACTCCTTCAGAGGTTGAGAGGGGAACCTCTGTCTAGAGACAGGCAACATGGTAGAGATTCTGTGGGTGAGGATCGGGAAAGTGAATCACCAAATGAAGTTGCAACTGGGGCTACTTTAGTTACTGACTTGACTTCTCAGATGGGAAGGTCCCAGTTCTTGCAGGAACTAAACAAAAAGCCACCTGGACTTACTCAGGAGGCCTTGGACTGTTTGGATCAGGAAGTTTTTAGCAGCAGCGAGACAGGATTGGAATCCAGGATAATGCAAGACTGTAGTATATGCTTGGAAACTTTCACAGATGGAGATGAGCTGATACGTCTGCCATGTGGACATAAATTCCACTCTGTTTGTTTGGATCCATGGATTCGCTCCTGTGGGGACTGCCCGTACTGTCGAAGACGTGTAGTTCTAAATACTCACTTACCATAA 714 0.4944 MTSASELFHTRRHRLGRNSLDLGFDTELQAADSFRRHYHVRRLRHHPERASDRISGRYRRTFVSDTVDSEENVRGGLAGSASERLPVGVILARTRLLQRLRGEPLSRDRQHGRDSVGEDRESESPNEVATGATLVTDLTSQMGRSQFLQELNKKPPGLTQEALDCLDQEVFSSSETGLESRIMQDCSICLETFTDGDELIRLPCGHKFHSVCLDPWIRSCGDCPYCRRRVVLNTHLP 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02778 237 SUPERFAMILY RING/U-box 185 233 - -
Phco6g02778 237 MobiDBLite consensus disorder prediction 102 125 - -
Phco6g02778 237 ProSiteProfiles Zinc finger RING-type profile. 186 227 IPR001841 -
Phco6g02778 237 SMART ring_2 186 226 IPR001841 -
Phco6g02778 237 PANTHER SI:CH211-59O9.10 32 231 - -
Phco6g02778 237 MobiDBLite consensus disorder prediction 102 128 - -
Phco6g02778 237 CDD RING-H2_PA-TM-RING 185 227 - -
Phco6g02778 237 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 143 231 IPR013083 -
Phco6g02778 237 Pfam Ring finger domain 185 227 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02778 Phco-Chr6 49112493 49114366 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02778 6 49112493 49114366 Phco6g02778 6 49112493 49114366 ECH