Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02746 ATGAAGGTTGCTAGAGAAGGTTGCAACTTTTTGTTCATTATCATTTGCCTTTTACTGATATCAGGGCTTGGCGTTCATGCTTTGTCTTATGATTATTCTGCTACCACAAAGTGCTTGGTAGAACCTGAGAGAGCACATTATGGAGGAGGCATTATAGTAAATCCAGCATTTGATCACAACATAGAGGGTTGGACAGCGTTTGGAAAAGGGTCTATCAAGGAACAAATATCGAATGAAGGCAATAGATTCATTGTTGCTCACAACAGAACCCAACCGCTGGATAGTTTCTCTCAGAAGGTCCAACTTCAGAAAGGAATGCTATACACCTTTTCTGCTTGGTTTCAGGTCAGTGAAGGAAGTGATACTGTGTCAGTCATGTTCAAAACAGAAGAAAGTGAACTGGTACGAGGTGGCCAAGTGATAGCAAAGCATGGATGCTGGACCCTTCTAAAAGGCGGCATAGCTGCAAACTTTTCAAGCCCTGTTGAAATTCTTTTTGAGAGTAAGAATTCAACTTTGGAAATATGGGCTGACAATGTCTCGTTACAACCATTCACTAAAAAGCAGTGGAGATCACTACAAGATGCCAGCATTGAGAGGGTACGCAAGAGGAGAGTGAGATTTCAGATAAATCGTGTAAATGAAACAGCATTGAAAGGAGCTAAAGTCATCGCCAAACCAGTGAAGTTGAACTTCCCATTTGGATGTGGAATGAACCATTATATCCTCACGAACAAAGACTACCAGAATTGGTTTGTGTCAAGGTTCAAATTCGCAACCTTCACCAATGAGATGAAGTGGTATAGTACAGAGAAAAAGCAAGGCGTGGAAAACTATACTATCTCAGATGCCATGCTGAAATTTACCAAAGAGAATGGCATTTCTGTGAGAGGCCATAACATTTTCTGGGACGATCCAAAATATCAGCCTGAATGGGTCAAGACCCTATCACCTGCGGATTTAGCGAAAGCAGTAGCAAAAAGAATGGAATCTGTGGTTTCAAGATACAAAGGACAACTGATTGCATGGGATGTGATGAATGAGAATCTCCACTTCCACTTCTTTGAGGACAAACTCGGCCAAAATGCCTCTGCAGAAGCTTATGCAACAGCTTACGAGATTGATCCAAAGCCAGAAATGTTCCTGAATGAGTATAACACCATTGAAGATAGTGGGGATGAGGCTTCCAGCCCAGTAAACTATATGAAGAAAATTAAGGAGATTCTGTCATTTCCAAGAGTTACTGGAATGTCAGCAGCAATAGGGCTGCAAGGCCATTTCGCTAGTGGCCAGCCAAACCTTGCTTACATGAGATCATCTCTTGATCTTCTTGCTACAACTGGACTTCCAATATGGCTCACAGAAGTGAGTGTGGATCCACAACCAAGTCAGGCAGAGTATCTGGAAGAGGTACTAAGAGAGGCCTACTCTCACCCTGCCGTGGATGGGATTATAATGTTTTCTGGTCCAGCACAAGCTGGTTTCAATACCACTACTCTGGCGGATGAGAATTTCAGAAATACTCCTGCAGGAGACGTTGTGGACAAGGTGATTCAGGAGTGGGGAACTGGGCCTAAGATTGCCGCAGCAGATGGCAGAGGAATAGTAGATATTTCACTGCACCATGGAGATTATGATGTAACTGTTACACATCCTCTGATTCACTCCCCTATAACAATGAATCTAAGTGTAAAGGAAGATTTTTCACTGGAAACCATTCATGTGAAAATGCGTACATAA 1740 0.4253 MKVAREGCNFLFIIICLLLISGLGVHALSYDYSATTKCLVEPERAHYGGGIIVNPAFDHNIEGWTAFGKGSIKEQISNEGNRFIVAHNRTQPLDSFSQKVQLQKGMLYTFSAWFQVSEGSDTVSVMFKTEESELVRGGQVIAKHGCWTLLKGGIAANFSSPVEILFESKNSTLEIWADNVSLQPFTKKQWRSLQDASIERVRKRRVRFQINRVNETALKGAKVIAKPVKLNFPFGCGMNHYILTNKDYQNWFVSRFKFATFTNEMKWYSTEKKQGVENYTISDAMLKFTKENGISVRGHNIFWDDPKYQPEWVKTLSPADLAKAVAKRMESVVSRYKGQLIAWDVMNENLHFHFFEDKLGQNASAEAYATAYEIDPKPEMFLNEYNTIEDSGDEASSPVNYMKKIKEILSFPRVTGMSAAIGLQGHFASGQPNLAYMRSSLDLLATTGLPIWLTEVSVDPQPSQAEYLEEVLREAYSHPAVDGIIMFSGPAQAGFNTTTLADENFRNTPAGDVVDKVIQEWGTGPKIAAADGRGIVDISLHHGDYDVTVTHPLIHSPITMNLSVKEDFSLETIHVKMRT 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02746 579 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 224 517 IPR001000 GO:0004553|GO:0005975
Phco6g02746 579 SMART glyco_10 265 518 IPR001000 GO:0004553|GO:0005975
Phco6g02746 579 Pfam Glycosyl hydrolase family 10 228 475 IPR001000 GO:0004553|GO:0005975
Phco6g02746 579 Pfam Carbohydrate binding domain 50 152 IPR003305 GO:0016798
Phco6g02746 579 SUPERFAMILY Galactose-binding domain-like 48 184 IPR008979 -
Phco6g02746 579 PANTHER GLYCOSYL HYDROLASE 28 566 IPR044846 GO:0004553|GO:0005975
Phco6g02746 579 Gene3D - 40 185 - -
Phco6g02746 579 Gene3D Glycosidases 225 524 - -
Phco6g02746 579 SUPERFAMILY (Trans)glycosidases 219 524 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02746 Phco-Chr6 48915138 48918723 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02746 6 48915138 48918723 Phco6g02746 6 48915138 48918723 ECH