Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02745 ATGAAGGTTTCTGCAGAAGGCTGCAACTTGTTGTTCATCACCATTTTCCTTTTACTAATCTCAGGCTATGGCGTCCATTCTTTGTCTTACCATTATTCTGCTACTACAGATTGCGTAGCAGAAGCTGAGAGAGCAGAGTATGGAGGAGGCATTATAGTAAATCCAGGATTTGATGAGAAGATAGAGGGTTGGAGAGTGTCTGGAAAAGGGTCCATCAAAGAAGGAATATCGAATGAAGGCAACAGATTCATTGTTGCTCACAACAGAGAACAACCGTTGGATAGTTTCTCTCAGAAGCTCCAACTCAGGAAAGGAATGCTATACACCTTTTCTGGTTGGTTTCAGGTGAGTGAAGGAAGTGACACAGTGTCAGTGATGTTCAGAGCAAAAGGAAGTGAACTGATACGAGGTGGCCAAGTGATGGCAAAGCATGGATGCTGGACCCTTCTAAAAGGCGGCATAACTGCAAACTTTTCAAGCCCTGTTGAGATTCTTTTTGAGAGCAAGAATTCAAGTGTAGAAATATGGGCAGACAATATTTCCTTACAACCATTCACTAAAAAGCAGTGGAGATCACTACAAGATGCCAGCATTGAGAAGGTACGTATGAGGAAGGTTAAATTCCTGGTAACCGATGAAAATGGAACAGCACTGAATGGAGCTAAAGTCATCACAAAAGCAGCAAAGTTGAACTTTCCATTTGGTTGTGGAATGAACCATTTTATCCTCACAAGCAAAGATTACCAGAACTGGTTTGCTTCAAGGTTCAAATTCACAACTTTCACCAACGAGATGAAGTGGTATAGTACGGAGAGAATCCAAGGGCAGGAAGACTACAGTATCGCAGATGCCATGCTAACATTTGCCGAAGAGAATGGCATTTCTGTGAGAGGCCATAACGTTTTGTGGGACGATGAGAAATATCTGCCTGAATGGATCAAGACCCTATCACCAGAGGATTTAAAGAAAGCAGCAGCAAAAAGAACGATGTCTGTGGTTTCAAGATACAAAGGACAAGTGATTGCATGGGATGTGATGAATGAGAATCTCCACTTCCACTTCTTTGAGGACAACCTCGGCCAAAATGCCTCTGCAGAAGCTTATGCAGCAGTTTTCGCGCTTGATCCAGGGACACAGATGTTCCTGAATGAGTTTAACACCATTGAATATAGTGGGGATCAGATAGCCAGCCCTGTCAAATATATAGAGAAAGTTAAGGAGATTCTGTCATTTCCAGGAGTTGCTGGAATGTCAGCAGCAATAGGATTGCAAGGCCATTTTGCTATTGGCCGGCCAAACCTTGCTTACATGAGATCGTCTCTTGATCTTCTTGCTACAACTGGACTTCCAATATGGCTCACAGAAGTGACTGTGGAACCACAACCAAGTCAGGCAGAGTACTTGGAACAGGTACTAAGAGAGGGGTATTCTCATCCTGCTGTTGCGGGGATTATCATGTTTGCTGGTCCAGCACAAGCTGGTTTCCTGCAAAATGCTCTGGCCGATGAGAATTTCATAAATACTCCATCTGGGGATGTTGTGGACAAGCTCATTAAGGAGTGGGGAACTGGGCCTAATATTGCCACAGCAGATGGCAGAGGAATAGTAGATATCTCACTGCACCATGGAGATTATGATGTAACTGTTATACATCCTCTATTCCACTCCCCTAGAAAGTTGAATCTAAGTGTAAATAGAGATTTTTCACTTGAAACCATTGATGTGAAAATGCATTAA 1737 0.4301 MKVSAEGCNLLFITIFLLLISGYGVHSLSYHYSATTDCVAEAERAEYGGGIIVNPGFDEKIEGWRVSGKGSIKEGISNEGNRFIVAHNREQPLDSFSQKLQLRKGMLYTFSGWFQVSEGSDTVSVMFRAKGSELIRGGQVMAKHGCWTLLKGGITANFSSPVEILFESKNSSVEIWADNISLQPFTKKQWRSLQDASIEKVRMRKVKFLVTDENGTALNGAKVITKAAKLNFPFGCGMNHFILTSKDYQNWFASRFKFTTFTNEMKWYSTERIQGQEDYSIADAMLTFAEENGISVRGHNVLWDDEKYLPEWIKTLSPEDLKKAAAKRTMSVVSRYKGQVIAWDVMNENLHFHFFEDNLGQNASAEAYAAVFALDPGTQMFLNEFNTIEYSGDQIASPVKYIEKVKEILSFPGVAGMSAAIGLQGHFAIGRPNLAYMRSSLDLLATTGLPIWLTEVTVEPQPSQAEYLEQVLREGYSHPAVAGIIMFAGPAQAGFLQNALADENFINTPSGDVVDKLIKEWGTGPNIATADGRGIVDISLHHGDYDVTVIHPLFHSPRKLNLSVNRDFSLETIDVKMH 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02745 578 SUPERFAMILY Galactose-binding domain-like 48 184 IPR008979 -
Phco6g02745 578 SMART glyco_10 265 488 IPR001000 GO:0004553|GO:0005975
Phco6g02745 578 Pfam Glycosyl hydrolase family 10 225 468 IPR001000 GO:0004553|GO:0005975
Phco6g02745 578 Pfam Carbohydrate binding domain 50 168 IPR003305 GO:0016798
Phco6g02745 578 PANTHER GLYCOSYL HYDROLASE 29 558 IPR044846 GO:0004553|GO:0005975
Phco6g02745 578 Gene3D - 40 185 - -
Phco6g02745 578 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 224 517 IPR001000 GO:0004553|GO:0005975
Phco6g02745 578 Gene3D Glycosidases 221 524 - -
Phco6g02745 578 SUPERFAMILY (Trans)glycosidases 219 524 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02745 Phco-Chr6 48908973 48913289 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02745 6 48908973 48913289 Phco6g02745 6 48908973 48913289 ECH