Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02735 ATGTCTCACTCACCGGACTCTCCCTCCGCCGCTTCTAACTTTCTCTGCCGCGAACACGCCATCGAGGTCACCTCCGACCACCACCGCCCGCCGACACCTCCCTTCCCGGATTCCGATGACCCGCCCATCACCTGCCTTCTCGACACCGAGGTCCACCACATGCCGGAGAAGGACTACCTCCGCCGCTGCCGCGACCGCTCCATCGACGTCACCGCGCGACTCGATGCCGTCAACTGGATCTTAAAGGTCCACGCATTCTACCAGTTTTCTCCGGTGACGGCGTTTCTCTCCGTCAACTATTTCGACCGTTTCCTCTCTCTATGTTCTCTTCCCCAATCGAGTAGGTGGCCGTTTCAGCTGCTATCAGTGGCATGCCTGTCTCTCGCTGCGAAAATGGAAGAGTCTCGTGTGCCGTTCTTACTGGACCTCCAACTCTTCGAACCCGAATTCGTGTTTGCTCCCAAAACGGTTCAGAGAATGGAGCTTTGGGTCATGTCCAATCTCAAATGGAGACTTCGCTCCGTCACGCCATACGATTATCTTCACTATTTCATCACCAAGCTTCCTTCTTCCTCTTCCTCCGAATCCACGAATCAGTTTTTCTCCACCGCCTCCAATCTCATCCTTAGCACCACTCGAGTGATTAACTTCTTGGGATTCACGCCCTCCGCAGTGGCAGCTGCCGCCGTGCTCTGCTCAGCTGGCCGCGGCATTGCTTCCCCCGACGCCCAATTGCCGCTGGGTTTTCATGATAGAGTAAACAATGAAATGGTGAGATGCTGTCACCAACTAATGGAGGAGTACGTGGTGGACACGTGTTACGCATCTAGCTCCGCCATCAAAGCGAGATTAGCCGAGCCGCCGCCATCCAGTCCCGTTGGCGTGCTAGACGCCGCCACATGTGTCAGCTGTGACACGCCTTCAGAGCGAAATTTCCTCAGCTCAGCCGAAGTACAACAGCAAGAAGCCGAGCCACCAAATAAACGGCTTCGATCCAATGCTCCGGATGCACCGCAGCGGTAG 1023 0.5582 MSHSPDSPSAASNFLCREHAIEVTSDHHRPPTPPFPDSDDPPITCLLDTEVHHMPEKDYLRRCRDRSIDVTARLDAVNWILKVHAFYQFSPVTAFLSVNYFDRFLSLCSLPQSSRWPFQLLSVACLSLAAKMEESRVPFLLDLQLFEPEFVFAPKTVQRMELWVMSNLKWRLRSVTPYDYLHYFITKLPSSSSSESTNQFFSTASNLILSTTRVINFLGFTPSAVAAAAVLCSAGRGIASPDAQLPLGFHDRVNNEMVRCCHQLMEEYVVDTCYASSSAIKARLAEPPPSSPVGVLDAATCVSCDTPSERNFLSSAEVQQQEAEPPNKRLRSNAPDAPQR 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02735 340 CDD CYCLIN_AtCycD-like_rpt2 175 265 - -
Phco6g02735 340 Gene3D - 46 241 - -
Phco6g02735 340 MobiDBLite consensus disorder prediction 313 340 - -
Phco6g02735 340 PANTHER CYCLINS 48 275 IPR039361 -
Phco6g02735 340 ProSitePatterns Cyclins signature. 73 104 IPR006671 -
Phco6g02735 340 Pfam Cyclin, C-terminal domain 175 273 IPR004367 -
Phco6g02735 340 MobiDBLite consensus disorder prediction 313 327 - -
Phco6g02735 340 SUPERFAMILY Cyclin-like 38 172 IPR036915 -
Phco6g02735 340 FunFam D6-type cyclin 170 263 - -
Phco6g02735 340 SMART cyclin_7 78 166 IPR013763 -
Phco6g02735 340 Pfam Cyclin, N-terminal domain 44 172 IPR006671 -
Phco6g02735 340 FunFam D2/4-type cyclin 56 169 - -
Phco6g02735 340 Gene3D - 56 173 - -
Phco6g02735 340 CDD CYCLIN_AtCycD-like_rpt1 72 170 - -
Phco6g02735 340 SMART Cyclin_C_2 175 304 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02735 Phco-Chr6 48816436 48817992 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02735 6 48816436 48817992 Phco6g02735 6 48816436 48817992 ECH