Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02728 ATGAAACTGAGACTCAGATCCTTGGAATCCAAAGAAACCCTCAAAATCGAAGTCCCCAATTCATGTTCTCTACAGCAACTCATCGACACCGTTTCTCACACCATTTCTTCTTCTTCCTCTTCTCTGCACCTTTCCCTCAACAGAAAGGACGAAATTCGCGCCTCTTCGCCGCACGACTCTCTCCACTCCCTTGGCGTGGCCGCCGGCGACCTCATCTTTTACTCTCTTAACCCCACCGCCTTTTCCCTCGAAACCCTCCCCCACAAGCCAGAAACCGCTTCCCGCGACCGACCCACCTTCCAAAACTCGCCGGAAGCTCTCGCCGGCGATTCCCCCTCGACCCCCACCGTTGAAAAGCATCCGACTTTGGACTCTGCGGAGGTGGAAACCGTCGAAATGGTTGATGGATCTGATGAGGCGGTGGCGGTGAGTACCAATTCAGAACCTTTCTTTGTGAAAAGTGTTATAAAAGAAGCCCTTGGAAACAACGTCAGTGATTTCAAGTTGTTAGTGTTTACGGTCCACGGTGTGGTTCTTGAATCTGGGTTTGTTAGAATCGACAAGGATTCGGGTATGGCGGTTAGTTGTTTTCACCTTCTTGATGATTCTCCTTCGTCGTCTTCTTCAATGATATCGTTGAGGTATGCCCTGCCTGAAATTCTGGTTGGTGGTGCTTCTCATAGTGTGAATTTGAGATTTCAGACATTGGGGCATTTTGTGAATGTTTGTGGGTCGTTGTCTGATGATACTGGCTCGAGGTTGCATTATGTTTGTTTGGATAGACGTAAATATGTTAGGCCATTAGAGTTGATGCTGGCAAATTCTGAATCTAAAGGCAGTGTTAATGACGGGGAAGAGATTATCTTTGGGAACGATGTTTTTGAAATGTGGAAGATGGTGAAAGACAGGCTTGCATTGCCACTGTTGATTGATCTTTGTGAAAAGGCTGGATTGGAGCTTCCACCTTGTTTCATGCGGTTACCGATGGAGATTAAGCTCTTGATTTTGGAGCGTCTTCCCGGTGTTGATTTGGCCAAAGTAGCTTGCACCTGTTCAGAGTTGCGATACTTGTCCACTAGCAATGAGTTGTGGAAGAAGAAGTATTTGGAGGAGTTTGGACAAGGAGAGACTAGAGGGTGGCTTTTCAAGGATTTGTTTGCTGTGTCCTGGGAAACAAAAAAGAGGTCTCAAGGGGTTCCTTTACGACGACATGGGATTTCAAGACACTTTATTCTCCCACCGAACCCCTTTAGAATGCCTCCTGCTCCAATTTGGGGTGGAGAATATGGTGTGCAGCCAGTCTATGGTGTTGCATTCCCTAGATACCAACCAAGCCGGATTATCATTCCTCCGTGTACTCTGAGAGATTTCAATCCATAA 1380 0.4703 MKLRLRSLESKETLKIEVPNSCSLQQLIDTVSHTISSSSSSLHLSLNRKDEIRASSPHDSLHSLGVAAGDLIFYSLNPTAFSLETLPHKPETASRDRPTFQNSPEALAGDSPSTPTVEKHPTLDSAEVETVEMVDGSDEAVAVSTNSEPFFVKSVIKEALGNNVSDFKLLVFTVHGVVLESGFVRIDKDSGMAVSCFHLLDDSPSSSSSMISLRYALPEILVGGASHSVNLRFQTLGHFVNVCGSLSDDTGSRLHYVCLDRRKYVRPLELMLANSESKGSVNDGEEIIFGNDVFEMWKMVKDRLALPLLIDLCEKAGLELPPCFMRLPMEIKLLILERLPGVDLAKVACTCSELRYLSTSNELWKKKYLEEFGQGETRGWLFKDLFAVSWETKKRSQGVPLRRHGISRHFILPPNPFRMPPAPIWGGEYGVQPVYGVAFPRYQPSRIIIPPCTLRDFNP 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02728 459 MobiDBLite consensus disorder prediction 96 120 - -
Phco6g02728 459 MobiDBLite consensus disorder prediction 89 121 - -
Phco6g02728 459 CDD F-box_AtSKIP22-like 323 368 - -
Phco6g02728 459 Gene3D - 149 324 - -
Phco6g02728 459 Pfam F-box-like 326 369 IPR001810 GO:0005515
Phco6g02728 459 PANTHER F-BOX PROTEIN SKIP22 1 449 - -
Phco6g02728 459 SUPERFAMILY F-box domain 321 381 IPR036047 GO:0005515
Phco6g02728 459 Gene3D - 1 75 - -
Phco6g02728 459 Gene3D - 325 408 - -
Phco6g02728 459 ProSiteProfiles F-box domain profile. 321 367 IPR001810 GO:0005515
Phco6g02728 459 SMART fbox_2 327 367 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02728 Phco-Chr6 48744139 48745518 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02728 6 48744139 48745518 Phco6g02728 6 48744139 48745518 ECH