Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02529 ATGCAGTCCCTTGGTCAAAATGAGGCCTCCCTAGCATGCCCTCAAGGTTGTTGCCCTTCTTTATTGTTCAATCCTCCACCACCACAGTCTCAGAACACAACAACCAAACCCAGAAACAGTTCTTCAGAGTGTCGCCACAGCTTTGTAGCCACGACGGCATCCTATATCTTCCCAAACACCAAATTCACCAACCATGAGTCCCTTCCTTCTCTTCATGAATCATTCAGTGAATTCAAGAAAGTGTATCCTCAATACTCCGAAACTGACCAGGTGGATCATGTGAGAGCTAAAGAATATTACCATCTCTCTTTCTCCAACCAATCATGCCTTGACTACATTGGTATTGGCCTCTTCTCCTATTACCAACGCCAACACCACCGTGACACCTCAAAAACCCAACTTGCCTCTTCTTCAACTCCTCAATCCCCAACCCAATATTCGGATATTCCCTTCTTTAGCATATCCTACAAGACTGGGAATTTGAAAACACTTTTACTTCATGGGGGACAGGAGTCAGAGTTTGAGTCTGCCATGAAGAGAAGAATAATGAAGTTTCTCAACATTTCTGAAAATGACTACTTTATGGTTTTCACAGCAAACAGAACTTCAGCTTTCAAACTTGTGGCAGACTCGTATCCGTTCCAATCTAGCAAGAAGCTTCTGACAGTTTATGACTATGAGAGTGAGGCAGTGGAAGCAATGATTAGTTGCTCAGAGAAGAGAGGAGCCAAGGCCATGTCAGCAGAGTTCTCATGGTCAAGGCTGAGAATTCAGTCAACAAAACTGAGGAAGATGATTGTTAGCAAGAGAAAAAAGAAGAAGAAGAGGGGTCTCTTTGTGTTTCCACTTCACTCCAGGGTAACAGGAGCAAGATATCCTTACCTGTGGATGAGTATAGCCCAGGAGAATGGATGGGATGTGTTGATTGATGCTTGTGCATTGGGACCCAAAGACATGGATAGCTTTGGCCTCTCTCTCTTTCAACCTGACTTTCTCATCTGTTCATTCTACAAGGTCTTCGGAGAAAATCCATCAGGGTTTGGATGCCTTTTTGTCAAGAAATCTGCTATCACCGCTCTTGAATCCTCCTCTTGTGCAGGAATTGTGAACCTCGTGCCTGATAGGTTTCTACATCAGTCATCACAAGAAAAGGGTTCTTCTGGGAACTGCAAACAAAAATCATTATCTAGCCTGCAAGACCAAGAATTGTCTTCCTTGAATTCTTTCTCTGGTCGGATACAAACTTCACAAGCTTTAAAAGTTGAAGAAGAATCATCAGAGCTTCAGATTATGGTGGCACCAGCAGAGCCAAAAGAAGGTTCTGGAAGTGTGGAAGCAAAAGAACTGGTTGAGAGCCTTCAAAATAAGAAATCACGAGATGGTGAGAGCGGGGGATTTAACATTGAGTGCAGATGTTTGGATCAAGTGGACTCTTTGGGATTGATAGTGATCACCAATAGAACAAGGTACCTGATAAATTGGCTGGTGAACTCCATGATGAAGCTGAAGCACCCTAATGCAGCAGGGGAACCCCTAGTCAAGATTTATGGCCCAAAGGTAAAATTCGATAGAGGACCTGCTTTGGCATTCAATGTGTTTGATTGGAAAGGTGAGAAGGTTGAGCCCGTCCTTGTACAGAAACTTGCTGATAGGAACAATATATCTCTCAGCTATGGGTTTCTGCATCATATTTGGTTTGCAGATAAGTATTCAGAAGACAAGGGAAAAGTTCTACAGACCAAAGAAGGAAGAGGCCACGGACTAACCACCAACAAGAAGAAAGATAAGGATAAGCTAGGAGTAACAGTAGTTACTGCTGCATTAAGCTTCCTGGCTAATTTTGAAGATGTATATAAACTATGGACTTTTGTTGCTAGGTTCCTTGATGCTGATTTTGTGGAGAAGGAGAGATGGAGATACACGGCTCTCAATCAGAAAACAATTGAAGTTTAA 1953 0.4286 MQSLGQNEASLACPQGCCPSLLFNPPPPQSQNTTTKPRNSSSECRHSFVATTASYIFPNTKFTNHESLPSLHESFSEFKKVYPQYSETDQVDHVRAKEYYHLSFSNQSCLDYIGIGLFSYYQRQHHRDTSKTQLASSSTPQSPTQYSDIPFFSISYKTGNLKTLLLHGGQESEFESAMKRRIMKFLNISENDYFMVFTANRTSAFKLVADSYPFQSSKKLLTVYDYESEAVEAMISCSEKRGAKAMSAEFSWSRLRIQSTKLRKMIVSKRKKKKKRGLFVFPLHSRVTGARYPYLWMSIAQENGWDVLIDACALGPKDMDSFGLSLFQPDFLICSFYKVFGENPSGFGCLFVKKSAITALESSSCAGIVNLVPDRFLHQSSQEKGSSGNCKQKSLSSLQDQELSSLNSFSGRIQTSQALKVEEESSELQIMVAPAEPKEGSGSVEAKELVESLQNKKSRDGESGGFNIECRCLDQVDSLGLIVITNRTRYLINWLVNSMMKLKHPNAAGEPLVKIYGPKVKFDRGPALAFNVFDWKGEKVEPVLVQKLADRNNISLSYGFLHHIWFADKYSEDKGKVLQTKEGRGHGLTTNKKKDKDKLGVTVVTAALSFLANFEDVYKLWTFVARFLDADFVEKERWRYTALNQKTIEV 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02529 650 SUPERFAMILY PLP-dependent transferases 174 370 IPR015424 -
Phco6g02529 650 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 72 610 - -
Phco6g02529 650 Pfam Aminotransferase class-V 177 367 IPR000192 -
Phco6g02529 650 Gene3D - 164 392 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02529 Phco-Chr6 46804673 46806625 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g00607 5 5916874 5918814 Phco6g02529 6 46804673 46806625 ECH
Phco6g02529 6 46804673 46806625 Phco6g02529 6 46804673 46806625 ECH
Phco5g00607 5 5916874 5918814 Phco6g02529 6 46804673 46806625 PCT