Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02528 ATGGGTTGGATATTGGAGAAATTTATATGGGCATTTCTTGTCGAGTGCACATTCCTTTCTGGTTTATCTCTTTCTCATCGAGCTTCAAAGTATGCATTTGTAAGAGAAGCAACGTCTGCTCCACCAATCTTGTCTTATGACTACATTGTCATTGGTGGAGGAACAAGTGGGTGTCCCCTCGCAGCAACCCTCTCGCAAGGTGCAAGAGTTTTAGTCCTTGAAAGGGGTGGTTCTCCTTACACAAACCCTGAGCGAATCAACATAAAGAACTTTGTCAATTCCCTCGCTGACATAAGCCCTTCATCATTTTCCCAACCGTTCATATCCACAGATGGGGTCCTCAATACCAGGGCTCGTGTTCTGGGTGGTGGCTCTGTCTTGAATGCTGGGTTCTATTCAAGGGCTAGCTCTGAGTACATAAGGAGTTCTGGTTGGAATGAATCTTTGGCTGAGGAATCTTATGAATGGGTTGAAAGAAAGGTGGTTTTTGAGCCCCCTATGCTGCAGTGGCAGTCAGCAGTGAGGGATGGGTTGCTGGAAGTAGGTGTGTTGCCTTATAATAATTTTACTTATGATCACTTAAATGGGACTAAGATTGGAGGGTCAATTTTTGACAAGAAGGGTAACAGGCACACTGCAGCTGATTTGTTAGAGTATGCTGATCCCAAGAGAATTTCTGTCTATCTCCATGCCACAGTGCAGAAGATACTATTTAAGTATAACACAGGAAAAAGAAGACCAGAAGCCTATGGAGTAATATTCAGAGATGCATTGGGAGTGATGCATAGAGCATACTTGAACACAAATGGAAAGAATGAGATAATCTTATCAGCTGGGGCAATTGGGAGTCCACAGTTGCTGATGCTGAGTGGGATTGGTCCTGCTAGACATCTGCAGGCTCATGGAATCACGGTGGTTTTGGATCAGCCCTGGGTGGGTCAAGAGATGGCAGATAATCCAATGAACGTTCTAGTGGTTCCTTCCCCTTTGCCTGTTGAACTCTCTCTGGTCCAAACAGTCGGCATCACAAAGTTTGGTAGCTTCATTGAAACCGGCAGTGGATTAAGTTTGGGCAATTCTTGGTCTGAAAGGCTTCAAAAGATTTTTGAATTTGTGTCAAACCAGTCTGGTCAGCCTTCGACGTTTTTCTCAGAAAACAAGCAGAGTGTTACAGATTTCGTTAGATATTTAAGCAATCCAACTCTGAAAGGAGGAATCATAGTTGAAAAGATCACGGGACCACTATCCAAAGGTCATTTGCAGCTCATAACCACAAATCCCAATGATAATCCATCAGTTACCTTTAACTATTTCAAGGATCCAGAGGACTTGAGAATCTGTGTTGAAGGCATGAAAACCATCATTGATGTGATAAACTCCAAAGCATTATCAAAATTCCGCTACCCCAACCTTTCAGTCCAAGCTCTAATAGACTTGATGTTGCTGATACCAATGAACTTGAGGCCAAAACATGTTAATGCTGCTTATTCTTTAGAACAGTATTGCATAGACACTGTGCTTACAATTTGGCATTACCATGGAGGGTGTCCCCCTCGTAAAGTTGTTGATCATAATTATAAGGTTATTGGGGTCGAAGCTCTGAGGGTAATTGATGGATCCACCTTTTATCGAACACCTGGGACTAATCCTCAAGCCACTGTAATGATGCTTGGAAGGTATATGGGAGAAAAAATTATAAATAAAAGATTCTTCAGTGGACACAAAAGTGAAGCGATCAATTGA 1743 0.4257 MGWILEKFIWAFLVECTFLSGLSLSHRASKYAFVREATSAPPILSYDYIVIGGGTSGCPLAATLSQGARVLVLERGGSPYTNPERINIKNFVNSLADISPSSFSQPFISTDGVLNTRARVLGGGSVLNAGFYSRASSEYIRSSGWNESLAEESYEWVERKVVFEPPMLQWQSAVRDGLLEVGVLPYNNFTYDHLNGTKIGGSIFDKKGNRHTAADLLEYADPKRISVYLHATVQKILFKYNTGKRRPEAYGVIFRDALGVMHRAYLNTNGKNEIILSAGAIGSPQLLMLSGIGPARHLQAHGITVVLDQPWVGQEMADNPMNVLVVPSPLPVELSLVQTVGITKFGSFIETGSGLSLGNSWSERLQKIFEFVSNQSGQPSTFFSENKQSVTDFVRYLSNPTLKGGIIVEKITGPLSKGHLQLITTNPNDNPSVTFNYFKDPEDLRICVEGMKTIIDVINSKALSKFRYPNLSVQALIDLMLLIPMNLRPKHVNAAYSLEQYCIDTVLTIWHYHGGCPPRKVVDHNYKVIGVEALRVIDGSTFYRTPGTNPQATVMMLGRYMGEKIINKRFFSGHKSEAIN 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02528 580 Gene3D - 46 558 IPR036188 -
Phco6g02528 580 Pfam GMC oxidoreductase 414 559 IPR007867 GO:0016614
Phco6g02528 580 Gene3D - 163 508 - -
Phco6g02528 580 PIRSF Alcohol_oxidase 26 576 IPR012132 GO:0050660
Phco6g02528 580 PANTHER OSJNBA0019K04.7 PROTEIN 13 569 - -
Phco6g02528 580 SUPERFAMILY FAD/NAD(P)-binding domain 44 569 IPR036188 -
Phco6g02528 580 Pfam GMC oxidoreductase 46 320 IPR000172 GO:0016614|GO:0050660
Phco6g02528 580 SUPERFAMILY FAD-linked reductases, C-terminal domain 317 515 - -
Phco6g02528 580 ProSitePatterns GMC oxidoreductases signature 2. 279 293 IPR000172 GO:0016614|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02528 Phco-Chr6 46793994 46796874 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02528 6 46793994 46796874 Phco6g02528 6 46793994 46796874 ECH