Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02488 ATGTTGTGTTTGTATGGAGCCATGAGGTCAATGCTGTTATTTCTCATTCTATCTGCCAAGCCTGACAACATGTTCAAGTCATGGAGCAAGAAGAACAAGATCAAAGCTGTGTTCAAATTGGAATTTCAGGCAACTCAGGTGCCAAAGATGAAAAAGAATGCAATAATGGTATCTTTGGTGCCAGATGATGTTGGTAAGACAACGGTGAAACTAGAGAAAACTGCTGCGCAAGATGGGACCTGCTCGTGGGAGAATCCAATTTTTGAACCCGTTAAACTTGTCAGGGATGCAAAATCAGGAAAAGTTCATGAGAAAATCTACCATTTCATTGTTTCAACCGGATCTTCAAAATCTGGCTTTCTCGGAGAAGCCTCAATTGATTTTGCTGATTTTGTTGCAGAAATTGAGCCAATGACTATTTCTCTACCCCTAAAGTTTGCCAATTCAGGCATAGTTTTACACGTGACTATTCAGAACGTGGAAGGATATGCTGCTGAAAGAAATGGGGAAGATAATGGAGCTGAGGAACTTTGCAGTGATAGAAGCTTGAAACACCAGCTGAGCTATGGCAGTACGGATCATGAAAGTTATAATGTTGATGAAAATGTACACATGACGAGGACCAGATCTGAGTATTCTGAACAAGATGCATCTAATGGCATTAGTCCTGTGCTAGCTTCATGGGAGGATCCTCATAGCTTTAGACAAAATTCAATTCCATCAAAAGGAACCGTTAAGGCCATTGCAACAGAAGCCCAAGTTCATAAGAGGTCAAACACAAACTGGTCAATGGGTTCGGCATCAGATGGAAGTTTAGGTGACTGGACTAACAGCCTGGAAGACAATCTTCCAAGAGAAAGATTACAAGAGCCTTCAAATAATGCCAATGAAAGCCTCAAGAATGAAATTGCTTCTTTGAAGAGGCAGGCAGAAGTGTCAGAAATAGAGTTACAATCACTTCGAAAGCAGATAGAAAAAGAAAGCAGCAGGGGACAGAATTTGTCAAGACAAATAATCAGCCTCAGAGAGGAGAGAGATTTGCTGAAAACCAAATACGAGCAACTCAAGTCCCAGCAGAACTTCAATAATGAGACCAAAACCTCCAAAACCTTGAAGTCTGAGATTGAAGATACTAGGCTTCAGTTAGAAGCAATAAAGGAAGAGCTTGTTTATGAAAAAGAATTGAGTGCCAATCTTCAATTGCAACTGCGGAAGACACAAAACTCAAATTCTGAATTACTTTTGGCTGTGACAGACCTTGAAGCAATGCTGGAACAAAAGGACAAGGAAATATTGGATTTATCTACGAATTTAAAATCCCAGAATACTACTAAGGAGCGTGGAGAGGGCATAGAATTTGACCTCTTGCGGCAAAAAATTGCAGACCAGGATGATGAAATAGACAATTACTGTAAGCAACGCGAAGAGCTAAGTGAGCAAATACAAGAACTTACTTTGGAGTATGATCTACTTAAGAAGGAAAATGTGGACATATCTTTGAGGTTAAAGCAAGATGAAGCACGCCACATCGTGTTACAAAATGAACATTCATCTTCCATAGTTACAATACAGCAACTTGAATCCCAAGTAGAGAGATTAGAAGAACAGCTAAAGGTGCAGGAAGATGAATTTTCAGCATCTCTGGTCTGCATCAAGGAGCTTGAAAATGAAGTCAAGTCATTGGAGAAAGAACTGAAAATACAGGAAGAGAAATTTGAAGAAGGTCTCCATGTCATGCAATGTGCAAAAACTGAGCAGGAAGAAAGGGCCTTCCAGGCAGAAGAAGCCTTGAGAAAGACAAGACACAACAATGCTGTTGCATCTGAGCGTTTTCAGGAGGAATATAGACTGCTTTCTGTTGAAATGGCACAAAAAGTTGAGGAGAATGAAAATATGGCCTTGAAAGCAGTTGCAGAGGCTGATGAGCTGCGGCAACAGAACAAACTAATAGAAGAAATGCTCCATAAGTGCAATCAAGAGCTCAGGCTTATCACAGATCAGAATGAATTGAAAATGAAAGAGCTTTTGGACCAAAGAGACTCGAAAGGAAAAATAATAGGACAGATGTCAAAAGAACTAGAAGTTAAGTCTAAACAACTTGAGGAAGCGAAAAGGCACTATGATGAAAAGGATGCTTCATTTTCCAAGCAAATTCAAATGCTCAGATCTCAAATTAAAATGTTGATGGAAGATGGTGTTTTGTCTGAAAAAGTAAGGGAAGATGCAAAAATAGCTCAGAAAGGACAACCACTTATGATGTCAAATGATGGGGAGATGATACTTGGCACGCTGTTGTCAGAAGTAGAAACCTTTAAGAACCAGCATATTGAAATAAAACACAGTTTGCATAGAGAACAAGTGGAGAAAGAAAGTATGAAGAAAAAGATATCTCAATTAGAAGGAGAGCTGAAGAAGAAGGAAGCGGAGTTAAGTACTATGGAAAAGAAGTACAAGAATAACAAAGGACGAGCTGCAGTTACACATATGAATTTGAATTCAAGAGACAACGAATGTGCTGTACCTTCGGCTAAGACACATACCAAGAAGTCAAAATCCGAAATGCAAAAGGGAAAGGATGCTTCAAGCAAGTCTGAAGGAGGAATAGTAAGCAAGTCAGCTGAGAGCAAAGTTTGTGAAGCTCCTGGAAGCGAGGGTGATTGCCATACAAATGAATTGTTGAATGAAGTTTCGCTACTAAAGGAAAAGAACAAGGTTATGGAGAGTGAGCTGAAAGACATGGAGGAAAGATATTCAGAGATTAGTCTGAAATTTGCAGAGGTAGAGGGAGAAAGACAACAGCTTGTTATGGCTCTACGCAATCTCAAGAATGGGAAGAAGAACTAA 2844 0.397 MLCLYGAMRSMLLFLILSAKPDNMFKSWSKKNKIKAVFKLEFQATQVPKMKKNAIMVSLVPDDVGKTTVKLEKTAAQDGTCSWENPIFEPVKLVRDAKSGKVHEKIYHFIVSTGSSKSGFLGEASIDFADFVAEIEPMTISLPLKFANSGIVLHVTIQNVEGYAAERNGEDNGAEELCSDRSLKHQLSYGSTDHESYNVDENVHMTRTRSEYSEQDASNGISPVLASWEDPHSFRQNSIPSKGTVKAIATEAQVHKRSNTNWSMGSASDGSLGDWTNSLEDNLPRERLQEPSNNANESLKNEIASLKRQAEVSEIELQSLRKQIEKESSRGQNLSRQIISLREERDLLKTKYEQLKSQQNFNNETKTSKTLKSEIEDTRLQLEAIKEELVYEKELSANLQLQLRKTQNSNSELLLAVTDLEAMLEQKDKEILDLSTNLKSQNTTKERGEGIEFDLLRQKIADQDDEIDNYCKQREELSEQIQELTLEYDLLKKENVDISLRLKQDEARHIVLQNEHSSSIVTIQQLESQVERLEEQLKVQEDEFSASLVCIKELENEVKSLEKELKIQEEKFEEGLHVMQCAKTEQEERAFQAEEALRKTRHNNAVASERFQEEYRLLSVEMAQKVEENENMALKAVAEADELRQQNKLIEEMLHKCNQELRLITDQNELKMKELLDQRDSKGKIIGQMSKELEVKSKQLEEAKRHYDEKDASFSKQIQMLRSQIKMLMEDGVLSEKVREDAKIAQKGQPLMMSNDGEMILGTLLSEVETFKNQHIEIKHSLHREQVEKESMKKKISQLEGELKKKEAELSTMEKKYKNNKGRAAVTHMNLNSRDNECAVPSAKTHTKKSKSEMQKGKDASSKSEGGIVSKSAESKVCEAPGSEGDCHTNELLNEVSLLKEKNKVMESELKDMEERYSEISLKFAEVEGERQQLVMALRNLKNGKKN 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02488 947 Coils Coil 410 437 - -
Phco6g02488 947 Coils Coil 686 710 - -
Phco6g02488 947 MobiDBLite consensus disorder prediction 841 860 - -
Phco6g02488 947 Coils Coil 782 823 - -
Phco6g02488 947 MobiDBLite consensus disorder prediction 256 279 - -
Phco6g02488 947 Coils Coil 460 501 - -
Phco6g02488 947 MobiDBLite consensus disorder prediction 838 889 - -
Phco6g02488 947 Coils Coil 889 930 - -
Phco6g02488 947 Coils Coil 296 358 - -
Phco6g02488 947 Coils Coil 516 543 - -
Phco6g02488 947 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 30 158 IPR019448 -
Phco6g02488 947 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 883 947 - -
Phco6g02488 947 Coils Coil 626 660 - -
Phco6g02488 947 Coils Coil 551 571 - -
Phco6g02488 947 Coils Coil 368 388 - -
Phco6g02488 947 ProSiteProfiles C2 NT-type domain profile. 26 161 IPR019448 -
Phco6g02488 947 MobiDBLite consensus disorder prediction 256 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02488 Phco-Chr6 46280787 46286888 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02488 6 46280787 46286888 Phco6g02488 6 46280787 46286888 ECH